RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 LRRC19Q9H756 370 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 NDFIP2Q9NV92 336 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 MYO5BQ9ULV0 1848 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 UBE3AQ05086 875 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 DGUOKQ16854 277 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 TMEM119Q4V9L6 283 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 AGKQ53H12 422 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 SAMD4BQ5PRF9 694 aaKnown RBP20.24■□□□□ 0.83
SHANK1-203ENST00000391813 LRRC39Q96DD0 335 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 SGF29Q96ES7 293 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 UBE2OQ9C0C9 1292 aaKnown RBP20.24■□□□□ 0.83
SHANK1-203ENST00000391813 NDUFS3O75489 264 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 ANXA9O76027 345 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 ZNF268Q14587 947 aaPredicted RBP20.24■□□□□ 0.83
SHANK1-203ENST00000391813 FAM13CQ8NE31 585 aa20.24■□□□□ 0.83
SHANK1-203ENST00000391813 PIWIL2Q8TC59 973 aaKnown RBP20.24■□□□□ 0.83
SHANK1-203ENST00000391813 DMPKQ09013 629 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 CRY2Q49AN0 593 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 MFSD5Q6N075 450 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 RIPOR1Q6ZS17 1223 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 PCSK9Q8NBP7 692 aaKnown RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 HES6Q96HZ4 224 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 PNMA5Q96PV4 448 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 CBWD1Q9BRT8 395 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 THUMPD3Q9BV44 507 aaKnown RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 OSBPL7Q9BZF2 842 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 UBAP1Q9NZ09 502 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 C6orf203Q9P0P8 240 aaPredicted RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 DYTNA2CJ06 578 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 KPNA6O60684 536 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 EDF1O60869 148 aaKnown RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 GRAP2O75791 330 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 EIF2S1P05198 315 aaKnown RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 RBP1P09455 135 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 CCDC130P13994 396 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 OAZ1P54368 228 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SPDYAQ5MJ70 313 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SVOPQ8N4V2 548 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 PDCD6IPQ8WUM4 868 aaKnown RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 USP13Q92995 863 aaPredicted RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 TMEM161AQ9NX61 479 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 MEI4A8MW99 385 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SOAT2O75908 522 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 PGM3O95394 542 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 LDLRP01130 860 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SOX11P35716 441 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 GP5P40197 560 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 NFYCQ13952 458 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 EMC2Q15006 297 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 CDCA5Q96FF9 252 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 TIMMDC1Q9NPL8 285 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SUPT3HB4E1H0 165 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 DCXO43602 365 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 MPOP05164 745 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 CYP2C9P11712 490 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SLC5A9Q2M3M2 681 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 TAS2R42Q7RTR8 314 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 CAMK1DQ8IU85 385 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 KIAA1257Q9ULG3 409 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
SHANK1-203ENST00000391813 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
SHANK1-203ENST00000391813 FKBP1BP68106 108 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 APOBEC3HQ6NTF7 200 aaKnown RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 ZNF554Q86TJ5 538 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 HEATR4Q86WZ0 1026 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 ABRAQ8N0Z2 381 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 STN1Q9H668 368 aaKnown RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 GALNT8Q9NY28 637 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 RUVBL2Q9Y230 463 aaKnown RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 PIN4Q9Y237 131 aaKnown RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 NKRFO15226 690 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 HOXC6P09630 235 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 MPP3Q13368 585 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 GTF2H3Q13889 308 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 PRELID2Q8N945 189 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 TMEM143Q96AN5 459 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 DIABLOQ9NR28 239 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 NCANO14594 1321 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 RNF103O00237 685 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 FESP07332 822 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 TMEM132DQ14C87 1099 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 TAS1R2Q8TE23 839 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 VPS33AQ96AX1 596 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 TAAR1Q96RJ0 339 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 COPS7BQ9H9Q2 264 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 CHST7Q9NS84 486 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 BLOC1S4Q9NUP1 217 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 AGPSO00116 658 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 DNM1LO00429 736 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 MAPTP10636 758 aaKnown RBP20.22■□□□□ 0.83
SHANK1-203ENST00000391813 SREBF1P36956 1147 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 FAAP100Q0VG06 881 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 NEDD8Q15843 81 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 KCNT1Q5JUK3 1230 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 ZNF618Q5T7W0 954 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 STRA8Q7Z7C7 330 aa20.22■□□□□ 0.83
SHANK1-203ENST00000391813 SNX32Q86XE0 403 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms