RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 MBD3L5A6NJ08 208 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 FAM90A7PA6NKC0 464 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 C16orf96A6NNT2 1141 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TBKBP1A7MCY6 615 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 FAM90A22PA8MWA6 464 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 FAM90A12PA8MX19 464 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 FAM90A23PA8MXZ1 464 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 C1QTNF9BB2RNN3 333 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TEX22C9J3V5 150 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 GCOM1H8Y6P7 765 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 POLRMTO00411 1230 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PSMA7O14818 248 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 BCAT2O15382 392 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TGFB1I1O43294 461 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CTIFO43310 598 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 HOXA3O43365 443 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ADAM20O43506 726 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CBFA2T3O75081 653 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 VPS4BO75351 444 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 HEXIM1O94992 359 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TGDSO95455 350 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 METTL18O95568 372 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CFIP05156 583 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 EIF2S1P05198 315 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 COX7A2P14406 83 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CD19P15391 556 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ITGB5P18084 799 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 HK1P19367 917 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 SAT1P21673 171 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 SDHBP21912 280 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ATP5F1P24539 256 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 EPHA3P29320 983 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PPIFP30405 207 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 GCH1P30793 250 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 UQCRC1P31930 480 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 IL13P35225 146 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PPARGP37231 505 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 THPOP40225 353 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 GSTM5P46439 218 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 GCLCP48506 637 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PCP4P48539 62 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 LMAN1P49257 510 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 GATMP50440 423 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TOB1P50616 345 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PDE6CP51160 858 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 HSD17B4P51659 736 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CLCN2P51788 898 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PGDP52209 483 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PRKAG1P54619 331 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 NPEPPSP55786 919 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 BPIFB3P59826 476 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 LILRA4P59901 499 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 RAP2BP61225 183 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 UBXN2AP68543 259 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ADAM8P78325 824 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ATP2C1P98194 919 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TIAL1Q01085 375 aaKnown RBP eCLIP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 UBXN1Q04323 297 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 GOLGA8FQ08AF8 430 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 NEXNQ0ZGT2 675 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 MYO1EQ12965 1108 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 THOC5Q13769 683 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TNFAIP1Q13829 316 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ACOX1Q15067 660 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ADIPOQQ15848 244 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PKN2Q16513 984 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ASIC2Q16515 512 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 NTRK2Q16620 822 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 PTCHD3Q3KNS1 767 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ZIK1Q3SY52 487 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 BMP2KLQ5H9B9 411 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 RAB41Q5JT25 222 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CERCAMQ5T4B2 595 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ATXN7L2Q5T6C5 722 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 LCE2CQ5TA81 110 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 AGBL4Q5VU57 503 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 KAZNQ674X7 775 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 SFRP4Q6FHJ7 346 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 HMBOX1Q6NT76 420 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TATDN1Q6P1N9 297 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ZNF449Q6P9G9 518 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 TRMT10BQ6PF06 316 aaKnown RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 KLHL35Q6PF15 583 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 NCEH1Q6PIU2 408 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 SYNE3Q6ZMZ3 975 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 USP30Q70CQ3 517 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 RAPH1Q70E73 1250 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 LARP4Q71RC2 724 aaKnown RBP eCLIP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 MED25Q71SY5 747 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 RTL10Q7L3V2 364 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 DOK3Q7L591 496 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CCDC186Q7Z3E2 898 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 CCDC91Q7Z6B0 441 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 DNAJB7Q7Z6W7 309 aaPredicted RBP1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ADGRG6Q86SQ4 1221 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 LDHDQ86WU2 507 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 WFDC3Q8IUB2 231 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 ERC1Q8IUD2 1116 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 EPHX4Q8IUS5 362 aa1.8□□□□□ -2.12
TRAJ39-201ENST00000390498 THNSL1Q8IYQ7 743 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms