RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 BEST1O76090 585 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 PENKP01210 267 aaPredicted RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 EPB41P11171 864 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ACADMP11310 421 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 NDUFV2P19404 249 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 WASP42768 502 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 HARS2P49590 506 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 MXI1P50539 228 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ORC1Q13415 861 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 EDRF1Q3B7T1 1238 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 PLEKHG6Q3KR16 790 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 EGFLAMQ63HQ2 1017 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 SPOPLQ6IQ16 392 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 IL27RAQ6UWB1 636 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 KIAA1324Q6UXG2 1013 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 Q6ZNB5 142 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ANKS1BQ7Z6G8 1248 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 PIP4P1Q86T03 277 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 MINDY1Q8N5J2 469 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ZNF557Q8N988 423 aaPredicted RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 TAS1R2Q8TE23 839 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 PLD4Q96BZ4 506 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ZNF419Q96HQ0 510 aaPredicted RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 MRGPRX1Q96LB2 322 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 TSG101Q99816 390 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 SCNM1Q9BWG6 230 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 PCED1AQ9H1Q7 454 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 FBRSQ9HAH7 460 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 PRDM16Q9HAZ2 1276 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 CACNA2D2Q9NY47 1150 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 MARCH2Q9P0N8 246 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 HESX1Q9UBX0 185 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 HOOK1Q9UJC3 728 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 GREB1Q4ZG55 1949 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ATXN2Q99700 1313 aaKnown RBP8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 ATRXP46100 2492 aa8.73□□□□□ -1.01
TRBV6-1-201ENST00000390353 CACNA1GO43497 2377 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 A0A1B0GTW7 788 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 A0A1B0GVL5 298 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 A0A1W2PQ27 194 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 A0A1W2PQ64 194 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 C1QTNF9BB2RNN3 333 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 PRRT4C9JH25 899 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 HHLA1C9JL84 531 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 ZBED1O96006 694 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 CISD3P0C7P0 127 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 C1QTNF9P0C862 333 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 PDE4CQ08493 712 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 EFEMP1Q12805 493 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 GPRIN1Q7Z2K8 1008 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 CPXM2Q8N436 756 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 ANKRD52Q8NB46 1076 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 ENGASEQ8NFI3 743 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 DDI1Q8WTU0 396 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 RNF139Q8WU17 664 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 PRCCQ92733 491 aaPredicted RBP8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 GOLGA1Q92805 767 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 BHMTQ93088 406 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 NUP58Q9BVL2 599 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 LRRC4Q9HBW1 653 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 ZDHHC4Q9NPG8 344 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 OSER1Q9NX31 292 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 RAB20Q9NX57 234 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 RASAL2Q9UJF2 1139 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 FBXO10Q9UK96 956 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 KIAA1257Q9ULG3 409 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 PLA2G4CQ9UP65 541 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 HPSEQ9Y251 543 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 MSRB2Q9Y3D2 182 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 STON1Q9Y6Q2 735 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 ZFYVE26Q68DK2 2539 aa8.72□□□□□ -1.01
TRBV6-1-201ENST00000390353 ANKRD11Q6UB99 2663 aaPredicted RBP8.71□□□□□ -1.01
TRBV6-1-201ENST00000390353 PKD1L2Q7Z442 2459 aa8.71□□□□□ -1.01
TRBV6-1-201ENST00000390353 FAM237AA0A1B0GTK4 181 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 GOLGA6L4A6NEF3 574 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 SLC16A3O15427 465 aaKnown RBP8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 SMC2O95347 1197 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 CER1O95813 267 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 LATS1O95835 1130 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 TRIM49P0CI25 452 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 TRIM49CP0CI26 452 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 CORO1AP31146 461 aaKnown RBP8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 TKTL1P51854 596 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 BCAT1P54687 386 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 MFAP3P55082 362 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 YWHAGP61981 247 aaKnown RBP eCLIP8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 PPP3CAQ08209 521 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 CETN1Q12798 172 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 DPYDQ12882 1025 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 ENPP2Q13822 863 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 SUZ12Q15022 739 aaKnown RBP8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 FUT11Q495W5 492 aa8.71□□□□□ -1.02
TRBV6-1-201ENST00000390353 MPPE1Q53F39 396 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms