RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 KRT5P13647 590 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF12P17014 697 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 ACAT1P24752 427 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 HSPA13P48723 471 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 MAMLD1Q13495 774 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 ITPRIPL1Q6GPH6 555 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 PDIK1LQ8N165 341 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 AGBL3Q8NEM8 1001 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 HSPH1Q92598 858 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF512Q96ME7 567 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF778Q96MU6 729 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 KCNK16Q96T55 309 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 THAP1Q9NVV9 213 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 HSPBP1Q9NZL4 362 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 PSME4Q14997 1843 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 SOBPA7XYQ1 873 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 CAPNS1P04632 268 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 BPGMP07738 259 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 OCM2P0CE71 109 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 OCMP0CE72 109 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 NSFP46459 744 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 TMED10P49755 219 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 PEX6Q13608 980 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 CYTH1Q15438 398 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 TTC39BQ5VTQ0 682 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 FRMD7Q6ZUT3 714 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 C12orf56Q8IXR9 622 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 SLC35B2Q8TB61 432 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 FAM151AQ8WW52 585 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 CMTM5Q96DZ9 223 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 HEPHQ9BQS7 1158 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 NACA2Q9H009 215 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 RNF11Q9Y3C5 154 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 SQORQ9Y6N5 450 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 DDX39AO00148 427 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 XPOTO43592 962 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 KRT1P04264 644 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 ELK3P41970 407 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 GPC3P51654 580 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 ZFYVE27Q5T4F4 411 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 DAW1Q8N136 415 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 LILRA2Q8N149 483 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 GALNT4Q8N4A0 578 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 SCAIQ8N9R8 606 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 TRPC4APQ8TEL6 797 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 TRIM56Q9BRZ2 755 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 EIF2AQ9BY44 585 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 SLC13A1Q9BZW2 595 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 C10orf88Q9H8K7 445 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 XAB2Q9HCS7 855 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 XPNPEP1Q9NQW7 623 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 TMX2Q9Y320 296 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 COQ4Q9Y3A0 265 aa15.14■□□□□ 0.01
VPS9D1-201ENST00000389386 LOC100653049A0A140TA62 436 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 KRT34O76011 436 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 RPL22P35268 128 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 SLC5A3P53794 718 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 GDF10P55107 478 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 ZCCHC23Q6ZST2 131 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 SLC26A11Q86WA9 606 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 WDR75Q8IWA0 830 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 TAB3Q8N5C8 712 aaPredicted RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 BORCS5Q969J3 196 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 STN1Q9H668 368 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 TUBA8Q9NY65 449 aaPredicted RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 HESX1Q9UBX0 185 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 TBC1D12O60347 775 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 RFPL1O75677 317 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 ADRB2P07550 413 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 SNRPAP09012 282 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 LIN9Q5TKA1 542 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 ANGEL2Q5VTE6 544 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 PLA2G4FQ68DD2 849 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 RWDD4Q6NW29 188 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 DCLRE1AQ6PJP8 1040 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 CHERPQ8IWX8 916 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 GRIN3AQ8TCU5 1115 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 MMP19Q99542 508 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 GPATCH1Q9BRR8 931 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 NUF2Q9BZD4 464 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 PAIP1Q9H074 479 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 ARMC7Q9H6L4 198 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 HOMER2Q9NSB8 354 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 XPO7Q9UIA9 1087 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 ZHX2Q9Y6X8 837 aa15.13■□□□□ 0.01
VPS9D1-201ENST00000389386 hCG_1818297A0A087WSY0 165 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 K7ENM7 598 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 XPO1O14980 1071 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 PSMC3P17980 439 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms