RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TUBP50607 506 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 CASP5P51878 434 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 COPAP53621 1224 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 C21orf59P57076 290 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 GRIN1Q05586 938 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 SURF1Q15526 300 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 GEN1Q17RS7 908 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 SNX30Q5VWJ9 437 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 PCSK4Q6UW60 755 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 FAM35AQ86V20 835 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 FAM181AQ8N9Y4 354 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 SORCS1Q8WY21 1168 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 FGF11Q92914 225 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 ZSCAN31Q96LW9 406 aaPredicted RBP10.18□□□□□ -0.78
IFT88-203ENST00000389373 STRA6Q9BX79 667 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 CIPCQ9C0C6 399 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 DMAP1Q9NPF5 467 aaPredicted RBP10.18□□□□□ -0.78
IFT88-203ENST00000389373 TLR8Q9NR97 1041 aaKnown RBP10.18□□□□□ -0.78
IFT88-203ENST00000389373 MARK1Q9P0L2 795 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 NUDT5Q9UKK9 219 aa10.18□□□□□ -0.78
IFT88-203ENST00000389373 GOLGA4Q13439 2230 aaKnown RBP10.18□□□□□ -0.78
IFT88-203ENST00000389373 CELSR3Q9NYQ7 3312 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 BRINP1O60477 761 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 GREM1O60565 184 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 HMBSP08397 361 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ZDHHC11BP0C7U3 371 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 DLATP10515 647 aaKnown RBP10.17□□□□□ -0.78
IFT88-203ENST00000389373 GAP43P17677 238 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 TNNI1P19237 187 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ABCB4P21439 1286 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 GRIA4P48058 902 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ZNF132P52740 706 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ORC1Q13415 861 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 TRPC3Q13507 836 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 LY6DQ14210 128 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 RTP5Q14D33 572 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ARHGAP40Q5TG30 622 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 SERPINA13PQ6UXR4 307 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 CBWD2Q8IUF1 395 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 FMNL3Q8IVF7 1028 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 SPACA3Q8IXA5 215 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 EID2Q8N6I1 236 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 JAKMIP2Q96AA8 810 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 BIRC7Q96CA5 298 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 TMEM176AQ96HP8 235 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 LGMNQ99538 433 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
IFT88-203ENST00000389373 FGFBP2Q9BYJ0 223 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 NRSN2Q9GZP1 204 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 LHX5Q9H2C1 402 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ELOVL2Q9NXB9 296 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.17□□□□□ -0.78
IFT88-203ENST00000389373 PCDHGA1Q9Y5H4 931 aa10.17□□□□□ -0.78
IFT88-203ENST00000389373 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 H3BQV1 296 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 NPC1O15118 1278 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 BEST1O76090 585 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 SEMA4FO95754 770 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 IGLV3-19P01714 112 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 KRT10P13645 584 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 ACO1P21399 889 aaKnown RBP10.16□□□□□ -0.78
IFT88-203ENST00000389373 ACTN2P35609 894 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 LONP1P36776 959 aaKnown RBP10.16□□□□□ -0.78
IFT88-203ENST00000389373 CTSKP43235 329 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 PLA2G4AP47712 749 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 MFAP3P55082 362 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 MAP3K7CLP57077 242 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 TLE3Q04726 772 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 C10orf120Q5SQS8 335 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 BROXQ5VW32 411 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 PAQR9Q6ZVX9 377 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 SV2BQ7L1I2 683 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 WDR49Q8IV35 697 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 ZNF366Q8N895 744 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 OR2T3Q8NH03 318 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 SNIP1Q8TAD8 396 aaKnown RBP10.16□□□□□ -0.78
IFT88-203ENST00000389373 GANCQ8TET4 914 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 P2RY11Q96G91 374 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 SMARCD1Q96GM5 515 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 EPSTI1Q96J88 318 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 SEMA4CQ9C0C4 833 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 BTBD1Q9H0C5 482 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 PCED1AQ9H1Q7 454 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 FBXO44Q9H4M3 255 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 COMMD8Q9NX08 183 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 IL37Q9NZH6 218 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 FBXO10Q9UK96 956 aa10.16□□□□□ -0.78
IFT88-203ENST00000389373 MUC22E2RYF6 1773 aaPredicted RBP10.16□□□□□ -0.78
IFT88-203ENST00000389373 A0A1B0GTQ1 180 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 A0A1W2PQH9 124 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 B8ZZF3 427 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 SLC28A2O43868 658 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 DFNA5O60443 496 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 PHACTR2O75167 634 aa10.15□□□□□ -0.78
IFT88-203ENST00000389373 DNTTP04053 509 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms