RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 BCAS3Q9H6U6 928 aa15.51■□□□□ 0.07
VLDLR-202ENST00000382099 WDR6Q9NNW5 1121 aaKnown RBP15.51■□□□□ 0.07
VLDLR-202ENST00000382099 DUOX1Q9NRD9 1551 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 A0A087WXM4 84 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 DCXO43602 365 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 LYPLA1O75608 230 aaPredicted RBP15.5■□□□□ 0.07
VLDLR-202ENST00000382099 AOC1P19801 751 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
VLDLR-202ENST00000382099 AP3M2P53677 418 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 STX3Q13277 289 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 SMU1Q2TAY7 513 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 TMEM119Q4V9L6 283 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 CATSPER3Q86XQ3 398 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 C17orf80Q9BSJ5 609 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 RETREG1Q9H6L5 497 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 COQ10BQ9H8M1 238 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 POLR1BQ9H9Y6 1135 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 SSU72Q9NP77 194 aaKnown RBP15.5■□□□□ 0.07
VLDLR-202ENST00000382099 PNPLA3Q9NST1 481 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 GIMAP4Q9NUV9 329 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 POLIQ9UNA4 740 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 DNAJC16Q9Y2G8 782 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 PCDHA2Q9Y5H9 948 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 CPQQ9Y646 472 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 KAT6AQ92794 2004 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 PTPN2P17706 415 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 SELENBP1Q13228 472 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 POLNQ7Z5Q5 900 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 ZNF34Q8IZ26 560 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 DAGLBQ8NCG7 672 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 FBXO36Q8NEA4 188 aa15.5■□□□□ 0.07
VLDLR-202ENST00000382099 SRP68Q9UHB9 627 aaKnown RBP15.5■□□□□ 0.07
VLDLR-202ENST00000382099 TESPA1A2RU30 521 aaPredicted RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 DENND3A2RUS2 1198 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 ALOX15BO15296 676 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 PSMC2P35998 433 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 USP41Q3LFD5 358 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 ANKRD26P1Q6NSI1 321 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 ADGRD1Q6QNK2 874 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 POTEGQ6S5H5 508 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 DSG4Q86SJ6 1040 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 RELL1Q8IUW5 271 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 PPWD1Q96BP3 646 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 MTMR9Q96QG7 549 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 CDRT15Q96T59 188 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 ANO3Q9BYT9 981 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 FOXP3Q9BZS1 431 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 DNPEPQ9ULA0 475 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 DCCP43146 1447 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 C7orf72A4D263 438 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 KMOO15229 486 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 CRKLP46109 303 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 CHRNDQ07001 517 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 LYSMD3Q7Z3D4 306 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 NATD1Q8N6N6 113 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 TRUB1Q8WWH5 349 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 GPR88Q9GZN0 384 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 TMEM117Q9H0C3 514 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 POLE4Q9NR33 117 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 TRIM49D1C9J1S8 452 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 TSPAN9O75954 239 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 ETV4P43268 484 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 HADHBP55084 474 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 RPS6P62753 249 aaKnown RBP15.49■□□□□ 0.07
VLDLR-202ENST00000382099 PHC1P78364 1004 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 CENPCQ03188 943 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 TTC23LQ6PF05 361 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 FRA10AC1Q70Z53 315 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 BTLAQ7Z6A9 289 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 ZNF280CQ8ND82 737 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 KAT5Q92993 513 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 SERPINI1Q99574 410 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 MKNK2Q9HBH9 465 aa15.49■□□□□ 0.07
VLDLR-202ENST00000382099 CLUHO75153 1309 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 LOC105371267A0A1B0GV96 52 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 SDR42E2A6NKP2 422 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 PLOD2O00469 737 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 XRCC1P18887 633 aaPredicted RBP15.48■□□□□ 0.07
VLDLR-202ENST00000382099 RFC4P35249 363 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 ITPK1Q13572 414 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 VWA5B1Q5TIE3 1220 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 PDPK2PQ6A1A2 396 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 CYP2U1Q7Z449 544 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 MTG1Q9BT17 334 aaPredicted RBP15.48■□□□□ 0.07
VLDLR-202ENST00000382099 SYT11Q9BT88 431 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 C20orf27Q9GZN8 174 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 PCDHGA11Q9Y5H2 935 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 PDXKO00764 312 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 FAM155BO75949 473 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 ENO3P13929 434 aaPredicted RBP15.48■□□□□ 0.07
VLDLR-202ENST00000382099 COPZ1P61923 177 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 CRY1Q16526 586 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 CHERPQ8IWX8 916 aaKnown RBP15.48■□□□□ 0.07
VLDLR-202ENST00000382099 FIBCD1Q8N539 461 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms