RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 FBXL19Q6PCT2 694 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 TSHZ1Q6ZSZ6 1077 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 USP37Q86T82 979 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 KCTD6Q8NC69 237 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 PARVAQ9NVD7 372 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 HEY1Q9Y5J3 304 aa14.33□□□□□ -0.11
SDC1-202ENST00000381150 BOLA2-SMG1P6H3BVE0 249 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 FKBP6O75344 327 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 PABPC4LP0CB38 370 aaKnown RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 RGS2P41220 211 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 MRPS22P82650 360 aaKnown RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 PPIDQ08752 370 aaKnown RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 NPNTQ6UXI9 565 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 ENOSF1Q7L5Y1 443 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 PTAR1Q7Z6K3 402 aaPredicted RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 ZNF276Q8N554 614 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 AZIN2Q96A70 460 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 ZBTB45Q96K62 511 aaPredicted RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 IP6K2Q9UHH9 426 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 SNCAIPQ9Y6H5 919 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 E9PBE3 544 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 NEMP1O14524 444 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 DCXO43602 365 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 KLHL41O60662 606 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 HLA-DRAP01903 254 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 OATP04181 439 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 IMPDH2P12268 514 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 ACO1P21399 889 aaKnown RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 GMPRP36959 345 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 ORC1Q13415 861 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 MSLNQ13421 630 aaPredicted RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 TARBP2Q15633 366 aaKnown RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 TREML2Q5T2D2 321 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 C6orf52Q5T4I8 152 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 TDRD10Q5VZ19 366 aaKnown RBP14.33□□□□□ -0.12
SDC1-202ENST00000381150 DLK2Q6UY11 383 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 LBX2Q6XYB7 198 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 DCUN1D5Q9BTE7 237 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 KCNK4Q9NYG8 393 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 BTBD7Q9P203 1132 aa14.33□□□□□ -0.12
SDC1-202ENST00000381150 A0A0J9YVX5 310 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 H0YCG3 227 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 HPCAP84074 193 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 NRF1Q16656 503 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 CDO1Q16878 200 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 DPY19L2Q6NUT2 758 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 SPATA18Q8TC71 538 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 USP13Q92995 863 aaPredicted RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 PGBD4Q96DM1 585 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 HAPLN3Q96S86 360 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 COPS7BQ9H9Q2 264 aaPredicted RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 ZC3H7BQ9UGR2 993 aaKnown RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 STRIP2Q9ULQ0 834 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 PPP2R3BQ9Y5P8 575 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 SCINQ9Y6U3 715 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 ADGRA2Q96PE1 1338 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 A0A088AWK7 358 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 GOLGA8QA0A0J9YX86 632 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 GOLGA8OA6NCC3 632 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 TTLL13PA6NNM8 815 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 CXorf49A8MYA2 514 aaPredicted RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 GOLGA8NF8WBI6 632 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 H3BSA7 217 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 PCSK6P29122 969 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 CCR3P51677 355 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 TBL3Q12788 808 aaKnown RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 ANKRD20A4Q4UJ75 823 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 SCARA3Q6AZY7 606 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 RNF111Q6ZNA4 994 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 AMIGO2Q86SJ2 522 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 EDNRBP24530 442 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 ABCD1P33897 745 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 LIG4P49917 911 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 TLR1Q15399 786 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 KLC3Q6P597 504 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 TCHPQ9BT92 498 aa14.32□□□□□ -0.12
SDC1-202ENST00000381150 SUDS3Q9H7L9 328 aaPredicted RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 XAB2Q9HCS7 855 aaKnown RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 AGO2Q9UKV8 859 aaKnown RBP14.32□□□□□ -0.12
SDC1-202ENST00000381150 BUD23O43709 281 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 TFPTP0C1Z6 253 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 SERPINB5P36952 375 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 NAMPTP43490 491 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 ALDH1A3P47895 512 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 PKNOX1P55347 436 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 C16orf72Q14CZ0 275 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 MON1BQ7L1V2 547 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 STKLD1Q8NE28 680 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 ZFP28Q8NHY6 868 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 CATSPER2Q96P56 530 aa14.31□□□□□ -0.12
SDC1-202ENST00000381150 WDR83Q9BRX9 315 aaKnown RBP14.31□□□□□ -0.12
SDC1-202ENST00000381150 R3HDMLQ9H3Y0 253 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms