RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PILRBQ9UKJ0 227 aa17.72■□□□□ 0.43
SMN2-201ENST00000380741 RAD54BQ9Y620 910 aa17.72■□□□□ 0.43
SMN2-201ENST00000380741 CETN3O15182 167 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 AP5Z1O43299 807 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 NDUFV2P19404 249 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 RAD23BP54727 409 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 ZNF252P-AS1Q0IIN9 211 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 EFEMP1Q12805 493 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 LMAN2Q12907 356 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 PNOCQ13519 176 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 UAP1L1Q3KQV9 507 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 PEAR1Q5VY43 1037 aaPredicted RBP17.71■□□□□ 0.43
SMN2-201ENST00000380741 SDE2Q6IQ49 451 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 PIGZQ86VD9 579 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 DEFB119Q8N690 84 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 TATDN2Q93075 761 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 CDK5RAP1Q96SZ6 601 aaKnown RBP17.71■□□□□ 0.43
SMN2-201ENST00000380741 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
SMN2-201ENST00000380741 IGHV1OR15-9A0A0B4J2B8 117 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 STX10O60499 249 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 HMBSP08397 361 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 ENGP17813 658 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 CORO1AP31146 461 aaKnown RBP17.7■□□□□ 0.42
SMN2-201ENST00000380741 DPP6P42658 865 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 MAPK8P45983 427 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 COG7P83436 770 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 SLC23A3Q6PIS1 610 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 SLC36A4Q6YBV0 504 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 SLC6A17Q9H1V8 727 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 FBXO10Q9UK96 956 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 CYP8B1Q9UNU6 501 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 ZNF510Q9Y2H8 683 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 PCDH15Q96QU1 1955 aa17.7■□□□□ 0.42
SMN2-201ENST00000380741 WASH3PC4AMC7 463 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 ZBTB24O43167 697 aaPredicted RBP17.69■□□□□ 0.42
SMN2-201ENST00000380741 PENKP01210 267 aaPredicted RBP17.69■□□□□ 0.42
SMN2-201ENST00000380741 CEACAM1P13688 526 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 CSRP1P21291 193 aaKnown RBP17.69■□□□□ 0.42
SMN2-201ENST00000380741 HOXD12P35452 270 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 PRCPP42785 496 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 DCAF17Q5H9S7 520 aaPredicted RBP17.69■□□□□ 0.42
SMN2-201ENST00000380741 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 TCERG1LQ5VWI1 586 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 FYB2Q5VWT5 728 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 UBXN6Q9BZV1 441 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 FSCN3Q9NQT6 498 aa17.69■□□□□ 0.42
SMN2-201ENST00000380741 TULP2O00295 520 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 GFRA2O00451 464 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 ZNF217O75362 1048 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 CFIP05156 583 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 CHKAP35790 457 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 MFAP3P55082 362 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 YWHAGP61981 247 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMN2-201ENST00000380741 ZNF33AQ06730 810 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 CACNA1EQ15878 2313 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 RSRC2Q7L4I2 434 aaKnown RBP17.68■□□□□ 0.42
SMN2-201ENST00000380741 SLC41A1Q8IVJ1 513 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 FMR1NBQ8N0W7 255 aaPredicted RBP17.68■□□□□ 0.42
SMN2-201ENST00000380741 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 ANKRD52Q8NB46 1076 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 DEFB124Q8NES8 71 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 MRGPRX1Q96LB2 322 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 DCLK3Q9C098 648 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 FAM124BQ9H5Z6 455 aaPredicted RBP17.68■□□□□ 0.42
SMN2-201ENST00000380741 RMND1Q9NWS8 449 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 MARCH2Q9P0N8 246 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 AGO1Q9UL18 857 aaKnown RBP17.68■□□□□ 0.42
SMN2-201ENST00000380741 SLC27A6Q9Y2P4 619 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 PCNX2A6NKB5 2137 aa17.68■□□□□ 0.42
SMN2-201ENST00000380741 SPEGQ15772 3267 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 SLC16A3O15427 465 aaKnown RBP17.67■□□□□ 0.42
SMN2-201ENST00000380741 TKTL1P51854 596 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 PMS1P54277 932 aaKnown RBP17.67■□□□□ 0.42
SMN2-201ENST00000380741 SLC8A3P57103 927 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 FOXC1Q12948 553 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 CUL2Q13617 745 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 GEN1Q17RS7 908 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 DUOXA1Q1HG43 343 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 GOLGA7BQ2TAP0 167 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 ZNF658Q5TYW1 1059 aaPredicted RBP17.67■□□□□ 0.42
SMN2-201ENST00000380741 DENND1CQ8IV53 801 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 ZC3H3Q8IXZ2 948 aaKnown RBP17.67■□□□□ 0.42
SMN2-201ENST00000380741 CEP76Q8TAP6 659 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 TSG101Q99816 390 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 TSPAN16Q9UKR8 245 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 STRIP2Q9ULQ0 834 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 SLC6A14Q9UN76 642 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 COQ4Q9Y3A0 265 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 STON1Q9Y6Q2 735 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 CKAP5Q14008 2032 aa17.67■□□□□ 0.42
SMN2-201ENST00000380741 SLC12A8A0AV02 714 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 ZBED1O96006 694 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms