RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 NT5C3BQ969T7 300 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 CFAP57Q96MR6 1250 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 PPP1R9BQ96SB3 815 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 RPP25Q9BUL9 199 aaKnown RBP13.22□□□□□ -0.29
SMN1-202ENST00000380707 DDX23Q9BUQ8 820 aaKnown RBP13.22□□□□□ -0.29
SMN1-202ENST00000380707 TRIM7Q9C029 511 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 SMOC2Q9H3U7 446 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
SMN1-202ENST00000380707 SLC12A8A0AV02 714 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 TMEM191CA6NGB0 347 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 ANHXE9PGG2 379 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 LEFTY2O00292 366 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 ARHGAP6O43182 974 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 TRUB2O95900 331 aaKnown RBP13.21□□□□□ -0.29
SMN1-202ENST00000380707 IGLV3-25P01717 112 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 HMBSP08397 361 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 TMEM253P0C7T8 217 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 PDGFRAP16234 1089 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 HTR4Q13639 388 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 SLC25A52Q3SY17 297 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 OTUD1Q5VV17 481 aaPredicted RBP13.21□□□□□ -0.29
SMN1-202ENST00000380707 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 CELF5Q8N6W0 485 aaKnown RBP13.21□□□□□ -0.29
SMN1-202ENST00000380707 SH3RF2Q8TEC5 729 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
SMN1-202ENST00000380707 WBP2Q969T9 261 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 ZNF830Q96NB3 372 aaPredicted RBP13.21□□□□□ -0.29
SMN1-202ENST00000380707 NPY6RQ99463 290 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 DESI2Q9BSY9 194 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 NUP85Q9BW27 656 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 PLA2G2FQ9BZM2 168 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 ZFP14Q9HCL3 533 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.29
SMN1-202ENST00000380707 NUMBLQ9Y6R0 609 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 SCINQ9Y6U3 715 aa13.21□□□□□ -0.29
SMN1-202ENST00000380707 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 HEPACAM2A8MVW5 462 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 IRF1P10914 325 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 COG7P83436 770 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 OGDHQ02218 1023 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 EIF4EBP2Q13542 120 aaPredicted RBP13.2□□□□□ -0.3
SMN1-202ENST00000380707 C15orf59Q2T9L4 293 aaPredicted RBP13.2□□□□□ -0.3
SMN1-202ENST00000380707 RAB6CQ53S08 254 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 MTSS1LQ765P7 747 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMN1-202ENST00000380707 ELSPBP1Q96BH3 223 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 TBCBQ99426 244 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 RAB6CQ9H0N0 254 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 KCNF1Q9H3M0 494 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 FAM204AQ9H8W3 233 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 KCNK12Q9HB15 430 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 CFAP97Q9P2B7 532 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 INTUQ9ULD6 942 aa13.2□□□□□ -0.3
SMN1-202ENST00000380707 NUP210Q8TEM1 1887 aaPredicted RBP13.2□□□□□ -0.3
SMN1-202ENST00000380707 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
SMN1-202ENST00000380707 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 M0QYT0 321 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 DPYSL4O14531 572 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
SMN1-202ENST00000380707 GREM1O60565 184 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 ECI2O75521 394 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 STC2O76061 302 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 IPO7O95373 1038 aaKnown RBP13.19□□□□□ -0.3
SMN1-202ENST00000380707 ASGR2P07307 311 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 GPD1P21695 349 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 SDC4P31431 198 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 PTPN9P43378 593 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 SULT1E1P49888 294 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
SMN1-202ENST00000380707 ATP11AP98196 1134 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 NME3Q13232 169 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
SMN1-202ENST00000380707 ZNF77Q15935 545 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 VITQ6UXI7 678 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 BNIPLQ7Z465 357 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 SLC35G2Q8TBE7 412 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 BTBD6Q96KE9 485 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 SERPINB11Q96P15 392 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 OSGEPQ9NPF4 335 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 OBP2AQ9NY56 170 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 TLR6Q9Y2C9 796 aa13.19□□□□□ -0.3
SMN1-202ENST00000380707 HBS1LQ9Y450 684 aaKnown RBP13.19□□□□□ -0.3
SMN1-202ENST00000380707 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
SMN1-202ENST00000380707 A0A0U1RQJ8 604 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms