RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 FAM200BP0CF97 657 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 CA4P22748 312 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 TKTP29401 623 aaKnown RBP13.08□□□□□ -0.32
VPS16-202ENST00000380445 ADCY1Q08828 1119 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 VPS52Q8N1B4 723 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 MCUQ8NE86 351 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 SENP8Q96LD8 212 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 CHMP2BQ9UQN3 213 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 IQANK1A0A1B0GTG1 560 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 ZWINTO95229 277 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 ASMTLO95671 621 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 RARBP10826 455 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 DCAF6Q58WW2 860 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
VPS16-202ENST00000380445 DENND1AQ8TEH3 1009 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 MRRFQ96E11 262 aaKnown RBP13.08□□□□□ -0.32
VPS16-202ENST00000380445 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.32
VPS16-202ENST00000380445 PAIP2Q9BPZ3 127 aaKnown RBP13.08□□□□□ -0.32
VPS16-202ENST00000380445 CD248Q9HCU0 757 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 DDX43Q9NXZ2 648 aaKnown RBP13.08□□□□□ -0.32
VPS16-202ENST00000380445 FZD10Q9ULW2 581 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 MYADML2A6NDP7 307 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 ATP2C2O75185 946 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 SPAG7O75391 227 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 ZNF189O75820 626 aaPredicted RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 GSTA2P09210 222 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 CYBAP13498 195 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 MLH1P40692 756 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 NRLP54845 237 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 CRHR2Q13324 411 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 SEPT7Q16181 437 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 CCDC185Q8N715 623 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 WDR83Q9BRX9 315 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 POPDC2Q9HBU9 364 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 PNPLA8Q9NP80 782 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 H3BRJ5 948 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 OAS1P00973 400 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 APRTP07741 180 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 KRT4P19013 534 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 AIF1P55008 147 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 FCGRTP55899 365 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS16-202ENST00000380445 IRX1P78414 480 aaPredicted RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 MDH1BQ5I0G3 518 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 KCNT2Q6UVM3 1135 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 CXCL17Q6UXB2 119 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 DSTYKQ6XUX3 929 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 CLEC20AQ6ZU45 233 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 TRPM8Q7Z2W7 1104 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 SPATA21Q7Z572 469 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 GBP7Q8N8V2 638 aaPredicted RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 NT5C3BQ969T7 300 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 QKIQ96PU8 341 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS16-202ENST00000380445 GAD1Q99259 594 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 PITPNM3Q9BZ71 974 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
VPS16-202ENST00000380445 ETNK1Q9HBU6 452 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 ARL2BPQ9Y2Y0 163 aa13.07□□□□□ -0.32
VPS16-202ENST00000380445 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 DNM1LO00429 736 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TYROBPO43914 113 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 GSTA1P08263 222 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 INHBAP08476 426 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 WDR4P57081 412 aaKnown RBP13.06□□□□□ -0.32
VPS16-202ENST00000380445 GBE1Q04446 702 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
VPS16-202ENST00000380445 RGS9BPQ6ZS82 235 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 DCAKDQ8WVC6 231 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TFB1MQ8WVM0 346 aaKnown RBP13.06□□□□□ -0.32
VPS16-202ENST00000380445 NPY6RQ99463 290 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 SYT15Q9BQS2 421 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 ADAM33Q9BZ11 813 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TCRBV9S1A1TA0A576 114 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 KLHL33A6NCF5 533 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 CLDN5O00501 218 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
VPS16-202ENST00000380445 TPSB2P20231 275 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TAC1P20366 129 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 SCTRP47872 440 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 RAB27AP51159 221 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TKTL1P51854 596 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 NKX3-2P78367 333 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 MTFR1Q15390 333 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 TPSAB1Q15661 275 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 PREPLQ4J6C6 727 aaPredicted RBP13.06□□□□□ -0.32
VPS16-202ENST00000380445 NCBP2-AS2Q69YL0 99 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 PAQR9Q6ZVX9 377 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 GSTCDQ8NEC7 633 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 CCDC110Q8TBZ0 833 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms