RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CYP4X1Q8N118 509 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 SEC14L1Q92503 715 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 SENP8Q96LD8 212 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 DCAF16Q9NXF7 216 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 PADI3Q9ULW8 664 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 WDR91A4D1P6 747 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 MBLAC1A4D2B0 266 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 THP07101 528 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 APRTP07741 180 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 OR4Q2P0C623 313 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 USP17L7P0C7H9 530 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 HSPA1AP0DMV8 641 aaKnown RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 HSPA1BP0DMV9 641 aaKnown RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 VCPP55072 806 aaKnown RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 MRPS6P82932 125 aaKnown RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 POU5F1BQ06416 359 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 PTK6Q13882 451 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 SDHAF4Q5VUM1 108 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 VPS52Q8N1B4 723 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 SIX6OS1Q8N1H7 587 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 CCDC185Q8N715 623 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 B3GALNT2Q8NCR0 500 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 IPCEF1Q8WWN9 437 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 N4BP2L2Q92802 583 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 RNF34Q969K3 372 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 TRPV6Q9H1D0 765 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 C12orf65Q9H3J6 166 aaKnown RBP11.22□□□□□ -0.61
NEDD9-201ENST00000379433 RAB6BQ9NRW1 208 aa11.22□□□□□ -0.61
NEDD9-201ENST00000379433 C2CD4BA6NLJ0 364 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 EBAG9O00559 213 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 AMPD1P23109 780 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 PBX3P40426 434 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 HALP42357 657 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 ZNF143P52747 638 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-201ENST00000379433 SLC7A5P1Q8MH63 180 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 DEFB106AQ8N104 65 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 GPR152Q8TDT2 470 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.21□□□□□ -0.61
NEDD9-201ENST00000379433 MTG1Q9BT17 334 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-201ENST00000379433 ALG13Q9NP73 1137 aaKnown RBP11.21□□□□□ -0.61
NEDD9-201ENST00000379433 INTS9Q9NV88 658 aaKnown RBP11.21□□□□□ -0.61
NEDD9-201ENST00000379433 GRIN2DO15399 1336 aa11.21□□□□□ -0.61
NEDD9-201ENST00000379433 CCDC78A2IDD5 438 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 ARL5CA6NH57 179 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 RBL1P28749 1068 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SULT1E1P49888 294 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SLC8A3P57103 927 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SLC6A3Q01959 620 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 GBE1Q04446 702 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 ENPEPQ07075 957 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 PLEKHG6Q3KR16 790 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 MICALCLQ6ZW33 695 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 RSPH3Q86UC2 560 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SLC7A14Q8TBB6 771 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SOCS4Q8WXH5 440 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 CFAP36Q96G28 342 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 B3GALT6Q96L58 329 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 PGLYRP2Q96PD5 576 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 TBCBQ99426 244 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 DDX56Q9NY93 547 aaKnown RBP11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 SNX10Q9Y5X0 201 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 MAD1L1Q9Y6D9 718 aa11.21□□□□□ -0.62
NEDD9-201ENST00000379433 DUSP11O75319 330 aaKnown RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 TTC4O95801 387 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CD4P01730 458 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ITGB1P05556 798 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SLC10A3P09131 477 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 RPL22P35268 128 aaKnown RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SCNN1BP51168 640 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CACNA2D1P54289 1103 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 YWHAGP61981 247 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SREBF2Q12772 1141 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SIM2Q14190 667 aaPredicted RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PPP2R5DQ14738 602 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SYPL2Q5VXT5 272 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 TP53INP2Q8IXH6 220 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 FAF2Q96CS3 445 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SPATA17Q96L03 361 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ZNF560Q96MR9 790 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 SIK2Q9H0K1 926 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 PIF1Q9H611 641 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ETNK2Q9NVF9 386 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 WDR35Q9P2L0 1181 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 NAALADL1Q9UQQ1 740 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 M0QYT0 321 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 LSM1O15116 133 aaKnown RBP11.2□□□□□ -0.62
NEDD9-201ENST00000379433 MGEA5O60502 916 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 ZBED1O96006 694 aa11.2□□□□□ -0.62
NEDD9-201ENST00000379433 F7P08709 466 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms