RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ITPKCQ96DU7 683 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PI4K2AQ9BTU6 479 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 SLC2A11Q9BYW1 496 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 SDCBP2Q9H190 292 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 VPS33BQ9H267 617 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ASNSD1Q9NWL6 643 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ADAM28Q9UKQ2 775 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 AGO2Q9UKV8 859 aaKnown RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PAIP2BQ9ULR5 123 aaKnown RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 BCS1LQ9Y276 419 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 INPP5FQ9Y2H2 1132 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PCDHA11Q9Y5I1 949 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF646O15015 1829 aaPredicted RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 TXNDC9O14530 226 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 KCNQ2O43526 872 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 BANF1O75531 89 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 COX4I1P13073 169 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 MX2P20592 715 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 TTKP33981 857 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 INHBCP55103 352 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 GDF10P55107 478 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 SNAP25P60880 206 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PHEXP78562 749 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 MTMR1Q13613 665 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 TLR1Q15399 786 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 FASTKD1Q53R41 847 aaKnown RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 STRIP1Q5VSL9 837 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 LPCAT4Q643R3 524 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 CDHR3Q6ZTQ4 885 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 LDHDQ86WU2 507 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 CTAGE3PQ8IX95 158 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 NDUFAF2Q8N183 169 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 RIN3Q8TB24 985 aa8.48□□□□□ -1.05
PTPRR-203ENST00000378778 SENP6Q9GZR1 1112 aaPredicted RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 RSL24D1Q9UHA3 163 aaKnown RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 CCNL1Q9UK58 526 aaPredicted RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 PTBP2Q9UKA9 531 aaKnown RBP8.48□□□□□ -1.05
PTPRR-203ENST00000378778 SH3PXD2BA1X283 911 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 LRCH4O75427 683 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 ALDH1A2O94788 518 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 CRTAMO95727 393 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 ASS1P00966 412 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 GH2P01242 217 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PROCP04070 461 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 FGF3P11487 239 aaPredicted RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 KRT3P12035 628 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 ETS2P15036 469 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 DNAJB1P25685 340 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 ALDH3B2P48448 385 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 IDH3AP50213 366 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 EMP3P54852 163 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 TXNL4AP83876 142 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SLC25A3Q00325 362 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 OGDHQ02218 1023 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PPIDQ08752 370 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 FRG1Q14331 258 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 FBXL19Q6PCT2 694 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 DARS2Q6PI48 645 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PACS1Q6VY07 963 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 WDR49Q8IV35 697 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 IGDCC3Q8IVU1 814 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 FAM71DQ8N9W8 422 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 KCTD6Q8NC69 237 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 ZFP28Q8NHY6 868 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 RP9Q8TA86 221 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 CDKL2Q92772 493 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SGF29Q96ES7 293 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 EBNA1BP2Q99848 306 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 IFT122Q9HBG6 1241 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PALMDQ9NP74 551 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 C8orf4Q9NR00 106 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 KLHL11Q9NVR0 708 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 DNAJC16Q9Y2G8 782 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 AP4B1Q9Y6B7 739 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 TCRBV7S3A2A0A539 114 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 CCDC162PA2VCL2 907 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SLCO1B7G3V0H7 640 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 PLIN3O60664 434 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 FBXO21O94952 628 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SRGAP2CP0DJJ0 459 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SRGAP2BP0DMP2 458 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 GARSP41250 739 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 NCOA4Q13772 614 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 LPIN1Q14693 890 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SYCP2LQ5T4T6 812 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 LLGL2Q6P1M3 1020 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 Q6ZNX1 250 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 RFX8Q6ZV50 586 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SH3BP5LQ7L8J4 393 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 CDKL3Q8IVW4 592 aaPredicted RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 DEFB107AQ8IZN7 70 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 CPSF7Q8N684 471 aaKnown RBP8.47□□□□□ -1.05
PTPRR-203ENST00000378778 SPATA18Q8TC71 538 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 GPRASP2Q96D09 838 aa8.47□□□□□ -1.05
PTPRR-203ENST00000378778 DUS3LQ96G46 650 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms