RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 GLRA4Q5JXX5 417 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 WASHC2DQ5SRD0 308 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 EP400NLQ6ZTU2 488 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 ARMC2Q8NEN0 867 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 KCTD15Q96SI1 283 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 MTMR10Q9NXD2 777 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 HESX1Q9UBX0 185 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 MTO1Q9Y2Z2 717 aaKnown RBP20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 PLLPQ9Y342 182 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 HMX2A2RU54 273 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 CDC25CP30307 473 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 SOWAHAQ2M3V2 549 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 MCUQ8NE86 351 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 SLC13A1Q9BZW2 595 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 ZNF395Q9H8N7 513 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 HES2Q9Y543 173 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 MAD1L1Q9Y6D9 718 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 F5H423 210 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 CYB561D2O14569 222 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 TRDMT1O14717 391 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 KLF11O14901 512 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 HNRNPCL1O60812 293 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 CCDC130P13994 396 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 ZBTB16Q05516 673 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 TMEM62Q0P6H9 643 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 GRIK4Q16099 956 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 DPYSL2Q16555 572 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 KIZQ2M2Z5 673 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 VPS52Q8N1B4 723 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 CCDC185Q8N715 623 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 ENDOVQ8N8Q3 282 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 SNX27Q96L92 541 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 EIF2AQ9BY44 585 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 PCMTD2Q9NV79 361 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 AP4E1Q9UPM8 1137 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 ECM2O94769 699 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 TOP3BO95985 862 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 ADORA2BP29275 332 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 SLC8A3P57103 927 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 BST1Q10588 318 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 KCNT2Q6UVM3 1135 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 RINLQ6ZS11 566 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 ALYREFQ86V81 257 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 OR6B3Q8NGW1 331 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 OXNAD1Q96HP4 312 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 NSL1Q96IY1 281 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 QKIQ96PU8 341 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 EBNA1BP2Q99848 306 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 BTBD10Q9BSF8 475 aa20.2■□□□□ 0.82
SHROOM1-202ENST00000378676 FAM159BA6NKW6 160 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 H3BRB1 525 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 FCHO1O14526 889 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 GCATO75600 419 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 GJA5P36382 358 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 PTPN9P43378 593 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 ZNF792Q3KQV3 632 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 HSF5Q4G112 596 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 DSTYKQ6XUX3 929 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 BZW1Q7L1Q6 419 aaKnown RBP20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 C7orf31Q8N865 590 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 GSDMBQ8TAX9 411 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 PPP1R13LQ8WUF5 828 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 LRRC39Q96DD0 335 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 TUT1Q9H6E5 874 aaKnown RBP20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 ARMCX1Q9P291 453 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 GINS2Q9Y248 185 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 CCDC22O60826 627 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 LCP1P13796 627 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 VAV1P15498 845 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 TPSB2P20231 275 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 TPSAB1Q15661 275 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 NCBP2-AS2Q69YL0 99 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 C4orf50Q6ZRC1 276 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 PYROXD2Q8N2H3 581 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 CSPG4P5Q96PW8 444 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 NMUR2Q9GZQ4 415 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 KATNBL1Q9H079 304 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 ARHGEF4Q9NR80 690 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 MKS1Q9NXB0 559 aa20.19■□□□□ 0.82
SHROOM1-202ENST00000378676 A6NJR5 290 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 ZNF487B1APH4 448 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 PPP1R12AO14974 1030 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 ADORA2AP29274 412 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 HOXA11P31270 313 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 TAF11Q15544 211 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 DCAF4L1Q3SXM0 396 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 TEX44Q53QW1 395 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 MROH9Q5TGP6 573 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 ARHGAP17Q68EM7 881 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 UNC5BQ8IZJ1 945 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 NETO2Q8NC67 525 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 SHCBP1Q8NEM2 672 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 CENPIQ92674 756 aaPredicted RBP20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 SLC17A6Q9P2U8 582 aa20.18■□□□□ 0.82
SHROOM1-202ENST00000378676 A8MXQ7 604 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 GSC2O15499 205 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms