RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 SNX27Q96L92 541 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 AGPAT1Q99943 283 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 RAB34Q9BZG1 259 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 NOCTQ9UK39 431 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 GJD2Q9UKL4 321 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 TNPO3Q9Y5L0 923 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 C15orf38-AP3S2A0A0A6YYH1 394 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 NPHP3-ACAD11A0A0J9YXS1 232 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 HAX1O00165 279 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 MAGEB3O15480 346 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 CALUO43852 315 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 AOC1P19801 751 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 FUT4P22083 530 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 ALDH3B2P48448 385 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 DYNLL1P63167 89 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 ZNF252P-AS1Q0IIN9 211 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 PRPF4BQ13523 1007 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 DRAP1Q14919 205 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 KRT79Q5XKE5 535 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 NEPROQ6NW34 567 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 DRICH1Q6PGQ1 229 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 TOM1L2Q6ZVM7 507 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 ARPINQ7Z6K5 226 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 ZNF34Q8IZ26 560 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 USP7Q93009 1102 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 VPS50Q96JG6 964 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 CFAP57Q96MR6 1250 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 CCDC77Q9BR77 488 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 TMEM120AQ9BXJ8 343 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 RIOX1Q9H6W3 641 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 IFT22Q9H7X7 185 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 C6orf50Q9HD87 102 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 CHST7Q9NS84 486 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 KCNK4Q9NYG8 393 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 RAB26Q9ULW5 256 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 FAM32AQ9Y421 112 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 PCDHGB6Q9Y5F9 930 aa6.93□□□□□ -1.3
CDKAL1-202ENST00000378610 SMCO2A6NFE2 343 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 ALOX15BO15296 676 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TGFB1I1O43294 461 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 INHBBP09529 407 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 ALOX15P16050 662 aaPredicted RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SLC1A1P43005 524 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 MAGEA4P43358 317 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 MTTPP55157 894 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 PDE1BQ01064 536 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 RELAQ04206 551 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SPIRE1Q08AE8 756 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TLR1Q15399 786 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 INAVAQ3KP66 663 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 FAM47AQ5JRC9 791 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 OLFML2BQ68BL8 750 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 PACS1Q6VY07 963 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 MAP7D3Q8IWC1 876 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SYT2Q8N9I0 419 aaPredicted RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 JADE3Q92613 823 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 MCUR1Q96AQ8 359 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 NSUN4Q96CB9 384 aaKnown RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 C7orf26Q96N11 449 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 APOL5Q9BWW9 433 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 DBNDD1Q9H9R9 158 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 FBXO6Q9NRD1 293 aaPredicted RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 CDH7Q9ULB5 785 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SORCS3Q9UPU3 1222 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 GIT1Q9Y2X7 761 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 FADS3Q9Y5Q0 445 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 CYP3A7-CYP3A51PA0A087WV96 503 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TRIM43BA6NCK2 446 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 ZNF701M0R085 212 aaPredicted RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 FCHO1O14526 889 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 EIF3DO15371 548 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SPAG7O75391 227 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TRMUO75648 421 aaKnown RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 NR3C1P04150 777 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 PLA2G4BP0C869 781 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 POU3F2P20265 443 aaPredicted RBP6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 CYP3A7P24462 503 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 CETN2P41208 172 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 FMO5P49326 533 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 MYBPC1Q00872 1141 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SLC18A2Q05940 514 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 LPIN1Q14693 890 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TMED2Q15363 201 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 CFAP157Q5JU67 520 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 UNC5DQ6UXZ4 953 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 HEATR3Q7Z4Q2 680 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 KBTBD6Q86V97 674 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 DEPTORQ8TB45 409 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TRPC4APQ8TEL6 797 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 DYDC2Q96IM9 177 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 TAAR9Q96RI9 348 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 RANBP9Q96S59 729 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 CDC6Q99741 560 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 SLC13A1Q9BZW2 595 aa6.92□□□□□ -1.3
CDKAL1-202ENST00000378610 UNC45AQ9H3U1 944 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms