RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 BNIPLQ7Z465 357 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 GRASPQ7Z6J2 395 aaPredicted RBP16.44■□□□□ 0.22
CCDC107-204ENST00000378409 TADA2BQ86TJ2 420 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 RHOT1Q8IXI2 618 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 UBL4BQ8N7F7 174 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 MRPS31Q92665 395 aaKnown RBP16.44■□□□□ 0.22
CCDC107-204ENST00000378409 CD101Q93033 1021 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 HES6Q96HZ4 224 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 GAS2L1Q99501 681 aaPredicted RBP16.44■□□□□ 0.22
CCDC107-204ENST00000378409 NACA2Q9H009 215 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 TRPC7Q9HCX4 862 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 PIGVQ9NUD9 493 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC107-204ENST00000378409 DNMT3BQ9UBC3 853 aaKnown RBP16.44■□□□□ 0.22
CCDC107-204ENST00000378409 RASAL2Q9UJF2 1139 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 USP18Q9UMW8 372 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC107-204ENST00000378409 CDH23Q9H251 3354 aa16.44■□□□□ 0.22
CCDC107-204ENST00000378409 A0A1W2PRU2 124 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 CCDC66A2RUB6 948 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 C2orf78A6NCI8 922 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 IRAK2O43187 625 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 PSTPIP1O43586 416 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 ENDOD1O94919 500 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 F9P00740 461 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 RHOP08100 348 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
CCDC107-204ENST00000378409 TUBP50607 506 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 EPHA5P54756 1037 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 NTHL1P78549 312 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 SLC25A11Q02978 314 aaKnown RBP16.43■□□□□ 0.22
CCDC107-204ENST00000378409 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 TMEM184AQ6ZMB5 413 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 PDZD4Q76G19 769 aaPredicted RBP16.43■□□□□ 0.22
CCDC107-204ENST00000378409 FAM131BQ86XD5 332 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 ZNF276Q8N554 614 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 LEMD2Q8NC56 503 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 KIF18AQ8NI77 898 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 KRT35Q92764 455 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 PGAP3Q96FM1 320 aaPredicted RBP16.43■□□□□ 0.22
CCDC107-204ENST00000378409 SERPINB11Q96P15 392 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 PEBP4Q96S96 227 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 PSMB7Q99436 277 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 APOL5Q9BWW9 433 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 MARCH2Q9P0N8 246 aa16.43■□□□□ 0.22
CCDC107-204ENST00000378409 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
CCDC107-204ENST00000378409 DDX3YO15523 660 aaKnown RBP16.42■□□□□ 0.22
CCDC107-204ENST00000378409 COCHO43405 550 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
CCDC107-204ENST00000378409 IGLV3-25P01717 112 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 KRT7P08729 469 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 GJA1P17302 382 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
CCDC107-204ENST00000378409 IL1R2P27930 398 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 CCR2P41597 374 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 ADAM15Q13444 863 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 SMTNL2Q2TAL5 461 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 LRRC38Q5VT99 294 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 TXNDC8Q6A555 127 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 TXNRD3NBQ6F5E7 133 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 ANKRD54Q6NXT1 300 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 MIB1Q86YT6 1006 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 CMASQ8NFW8 434 aaPredicted RBP16.42■□□□□ 0.22
CCDC107-204ENST00000378409 SHKBP1Q8TBC3 707 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 UBE2Q2Q8WVN8 375 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 RNF34Q969K3 372 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 ACSF2Q96CM8 615 aaPredicted RBP16.42■□□□□ 0.22
CCDC107-204ENST00000378409 TCEAL4Q96EI5 215 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 KLHL11Q9NVR0 708 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 DNMT3LQ9UJW3 386 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
CCDC107-204ENST00000378409 SLC12A8A0AV02 714 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 KCNK3O14649 394 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 CXCR5P32302 372 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 CXCR3P49682 368 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 TBX4P57082 545 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 TEAD2Q15562 447 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 TRIP4Q15650 581 aaPredicted RBP16.41■□□□□ 0.22
CCDC107-204ENST00000378409 SLC5A9Q2M3M2 681 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 ATP13A4Q4VNC1 1196 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 ARHGAP15Q53QZ3 475 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 PAPD7Q5XG87 772 aaKnown RBP16.41■□□□□ 0.22
CCDC107-204ENST00000378409 KLHDC10Q6PID8 442 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 EP400NLQ6ZTU2 488 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 CCDC185Q8N715 623 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 HSPH1Q92598 858 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 ALG3Q92685 438 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 WDR6Q9NNW5 1121 aaKnown RBP16.41■□□□□ 0.22
CCDC107-204ENST00000378409 CLDND1Q9NY35 253 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 SNX12Q9UMY4 172 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 TLR6Q9Y2C9 796 aa16.41■□□□□ 0.22
CCDC107-204ENST00000378409 NRG2O14511 850 aaPredicted RBP16.4■□□□□ 0.22
CCDC107-204ENST00000378409 PAPLNO95428 1278 aa16.4■□□□□ 0.22
CCDC107-204ENST00000378409 KRT1P04264 644 aa16.4■□□□□ 0.22
CCDC107-204ENST00000378409 HMBSP08397 361 aa16.4■□□□□ 0.22
CCDC107-204ENST00000378409 RARAP10276 462 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms