RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 BCAT1P54687 386 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 NSUN2Q08J23 767 aaKnown RBP eCLIP8.4□□□□□ -1.07
CKAP2-203ENST00000378037 WDTC1Q8N5D0 677 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 URGCPQ8TCY9 931 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 BLOC1S5Q8TDH9 187 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 FBXO32Q969P5 355 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 AZIN2Q96A70 460 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 STMN4Q9H169 189 aaPredicted RBP8.4□□□□□ -1.07
CKAP2-203ENST00000378037 PRDM12Q9H4Q4 367 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 CYP4F12Q9HCS2 524 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 ZFATQ9P243 1243 aa8.4□□□□□ -1.07
CKAP2-203ENST00000378037 LOC285556D6RIA3 1793 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 DOCK5Q9H7D0 1870 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 CFLARO15519 480 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 CKMP06732 381 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ERVK-10P10266 1014 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 HOXD10P28358 340 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 HOXA11P31270 313 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 PHBP35232 272 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 SLC1A1P43005 524 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ARL13BQ3SXY8 428 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 LRRC73Q5JTD7 316 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ANKRD23Q86SG2 305 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 OSTM1Q86WC4 334 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 XYLT1Q86Y38 959 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NSMCE1Q8WV22 266 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 RUNDC3BQ96NL0 473 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 MECRQ9BV79 373 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NSRP1Q9H0G5 558 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ZDHHC4Q9NPG8 344 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 UTP6Q9NYH9 597 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NINJ2Q9NZG7 142 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 WDR27A2RRH5 827 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ARHGAP42A6NI28 874 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 COPEO14579 308 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NRP1O14786 923 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 RIPK2O43353 540 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 CYP1A2P05177 515 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 HSPA6P17066 643 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ITGB6P18564 788 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 MGAT1P26572 445 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 PSMB4P28070 264 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 TYK2P29597 1187 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 C1QBPQ07021 282 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 BST2Q10589 180 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 PTK7Q13308 1070 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NOMO1Q15155 1222 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NOMO2Q5JPE7 1267 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ERMARDQ5T6L9 678 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 TRIM68Q6AZZ1 485 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 TMC7Q7Z402 723 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 POLNQ7Z5Q5 900 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 SPATA22Q8NHS9 363 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 DDX1Q92499 740 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 YME1L1Q96TA2 773 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 TM6SF2Q9BZW4 377 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 XYLT2Q9H1B5 865 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 SP110Q9HB58 689 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 KLHL14Q9P2G3 628 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ADAMTS5Q9UNA0 930 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 GMNCA6NCL1 334 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NCF1BA6NI72 391 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NCF1CA8MVU1 366 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 CBX4O00257 560 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 MAP2K7O14733 419 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 UGT1A9O60656 530 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 LPXNO60711 386 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NCF1P14598 390 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 AP3M2P53677 418 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 SETDB1Q15047 1291 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 PSMD5Q16401 504 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 KBTBD12Q3ZCT8 623 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 LVRNQ6Q4G3 990 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 CYP4X1Q8N118 509 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NDUFAF2Q8N183 169 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 PPP4R1Q8TF05 950 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 DDX27Q96GQ7 796 aaKnown RBP8.39□□□□□ -1.07
CKAP2-203ENST00000378037 CYTH2Q99418 400 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 UGT1A7Q9HAW7 530 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 UGT1A10Q9HAW8 530 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 UGT1A8Q9HAW9 530 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ETNK1Q9HBU6 452 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 NT5MQ9NPB1 228 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 TRPV2Q9Y5S1 764 aa8.39□□□□□ -1.07
CKAP2-203ENST00000378037 HMGB1P1B2RPK0 211 aaPredicted RBP8.38□□□□□ -1.07
CKAP2-203ENST00000378037 NDC80O14777 642 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 DGKIO75912 1065 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 GSTA1P08263 222 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 GSTA2P09210 222 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 OR1D2P34982 312 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 PURAQ00577 322 aaKnown RBP8.38□□□□□ -1.07
CKAP2-203ENST00000378037 SLC6A3Q01959 620 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 KDSRQ06136 332 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 MYBPC2Q14324 1141 aa8.38□□□□□ -1.07
CKAP2-203ENST00000378037 GRB14Q14449 540 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms