RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MFAP3LO75121 409 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 IRF1P10914 325 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 NOS2P35228 1153 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 CDK17Q00537 523 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 AMPD2Q01433 879 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 TAF5Q15542 800 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 DCAF6Q58WW2 860 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 FAM102AQ5T9C2 384 aaPredicted RBP13.82□□□□□ -0.2
CKAP2-202ENST00000378034 SYPL2Q5VXT5 272 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 Q6ZNB5 142 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 MON1BQ7L1V2 547 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 BMP8AQ7Z5Y6 402 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 ADGRG2Q8IZP9 1017 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 DEFB106AQ8N104 65 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 C11orf70Q9BRQ4 267 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 EBF3Q9H4W6 596 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 HPS4Q9NQG7 708 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 SFMBT1Q9UHJ3 866 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 CA14Q9ULX7 337 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 TLR6Q9Y2C9 796 aa13.82□□□□□ -0.2
CKAP2-202ENST00000378034 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.24e-13■■■■□ 22.4
CKAP2-202ENST00000378034 MAN2B1O00754 1011 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 LATS1O95835 1130 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 GBP1P32455 592 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 MATKP42679 507 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 HARS2P49590 506 aaKnown RBP13.81□□□□□ -0.2
CKAP2-202ENST00000378034 STARD6P59095 220 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 NUGGCQ68CJ6 796 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 UNC45BQ8IWX7 931 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 SIX5Q8N196 739 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 LINC00597Q9H2U6 94 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 ECT2Q9H8V3 914 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 HEBP1Q9NRV9 189 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 ABHD10Q9NUJ1 306 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.81□□□□□ -0.2
CKAP2-202ENST00000378034 GTSE1Q9NYZ3 720 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 TMEM59LQ9UK28 342 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
CKAP2-202ENST00000378034 KRBA1A5PL33 1030 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 GPR37L1O60883 481 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 RTN2O75298 545 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 GRAP2O75791 330 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 IGLV3-25P01717 112 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 IGLV3-27P01718 113 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TBX4P57082 545 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TNK2Q07912 1038 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 RALGPS2Q86X27 583 aaPredicted RBP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 MCOLN2Q8IZK6 566 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 C3orf20Q8ND61 904 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 WBP2Q969T9 261 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 EXOC4Q96A65 974 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 AZIN2Q96A70 460 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TRIM11Q96F44 468 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 DDX23Q9BUQ8 820 aaKnown RBP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 ARHGAP20Q9P2F6 1191 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 PIAS3Q9Y6X2 628 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 SSU72P8A0A1W2PR75 194 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 GOLGA8SH3BPF8 625 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 HMBSP08397 361 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 ARSAP15289 507 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 CDC25BP30305 580 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 CORO1AP31146 461 aaKnown RBP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 CHKAP35790 457 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 MTA1Q13330 715 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 EIF4EBP2Q13542 120 aaPredicted RBP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 ZNF852Q6ZMS4 543 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TAC4Q86UU9 113 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 NT5C3BQ969T7 300 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 NELL2Q99435 816 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 ADAMTS1Q9UHI8 967 aa13.8□□□□□ -0.2
CKAP2-202ENST00000378034 MRPS17Q9Y2R5 130 aaKnown RBP13.8□□□□□ -0.2
CKAP2-202ENST00000378034 TECTAO75443 2155 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 SIGLEC16A6NMB1 481 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 IRAK2O43187 625 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 MSI1O43347 362 aaKnown RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 ADH1CP00326 375 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 FTLP02792 175 aaPredicted RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 KLKB1P03952 638 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 MYBL1P10243 752 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 SLC2A3P11169 496 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 SLC25A52Q3SY17 297 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 TPRG1Q6ZUI0 275 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 PGAP3Q96FM1 320 aaPredicted RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 SLC39A13Q96H72 371 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 NPY6RQ99463 290 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 SELENOOQ9BVL4 669 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
CKAP2-202ENST00000378034 MFSD1Q9H3U5 465 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 FAM204AQ9H8W3 233 aa13.79□□□□□ -0.2
CKAP2-202ENST00000378034 TAS2R14Q9NYV8 317 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms