RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 NUDT17P0C025 328 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 ZFXP17010 805 aaPredicted RBP18.36■□□□□ 0.53
CTTN-203ENST00000376561 GOT1P17174 413 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 FGFR3P22607 806 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 STIP1P31948 543 aaKnown RBP18.36■□□□□ 0.53
CTTN-203ENST00000376561 PBX3P40426 434 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 ARL4AP40617 200 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.36■□□□□ 0.538e-7■■■■□ 21.3
CTTN-203ENST00000376561 FAM71DQ8N9W8 422 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 FAM204AQ9H8W3 233 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 DDIT4Q9NX09 232 aa18.36■□□□□ 0.53
CTTN-203ENST00000376561 GOLGA6CA6NDK9 693 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 H7C0C1 242 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 GOLGA6DP0CG33 693 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 ATP5OP48047 213 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 AIF1P55008 147 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 SLC29A2Q14542 456 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 DENND2CQ68D51 928 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 ZNF280DQ6N043 979 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 B4GALNT4Q76KP1 1039 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 SCN4BQ8IWT1 228 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 LRRC43Q8N309 656 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 PWWP2AQ96N64 755 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 TMEM39AQ9NV64 488 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 GOLGA6AQ9NYA3 693 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 ADAM21Q9UKJ8 722 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 RIPK2O43353 540 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 RPL22P35268 128 aaKnown RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 ADRA1BP35368 520 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 EIF3BP55884 814 aaKnown RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 IKBKEQ14164 716 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 EFHC2Q5JST6 749 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 UBAP2Q5T6F2 1119 aaKnown RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 CNKSR3Q6P9H4 555 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 VSTM1Q6UX27 236 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 TRMT10CQ7L0Y3 403 aaKnown RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 TMEM173Q86WV6 379 aaPredicted RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 NTAN1Q96AB6 310 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 TRIM62Q9BVG3 475 aa18.35■□□□□ 0.53
CTTN-203ENST00000376561 CDC42EP4Q9H3Q1 356 aaKnown RBP18.35■□□□□ 0.53
CTTN-203ENST00000376561 GOLGA6L10A6NI86 522 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 OR6C75A6NL08 312 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 UPP2O95045 317 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 MAP3K6O95382 1288 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 F9P00740 461 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 AMPD1P23109 780 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 IFRD2Q12894 506 aaPredicted RBP18.34■□□□□ 0.53
CTTN-203ENST00000376561 ELAVL2Q12926 359 aaKnown RBP18.34■□□□□ 0.53
CTTN-203ENST00000376561 MORF4L2Q15014 288 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 RNASEH2BQ5TBB1 312 aaKnown RBP18.34■□□□□ 0.53
CTTN-203ENST00000376561 BEND5Q7L4P6 421 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 ZCCHC9Q8N567 271 aaKnown RBP18.34■□□□□ 0.53
CTTN-203ENST00000376561 RNF139Q8WU17 664 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 VWCEQ96DN2 955 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 PGLYRP2Q96PD5 576 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 FOXP3Q9BZS1 431 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 DNAJC17Q9NVM6 304 aaKnown RBP18.34■□□□□ 0.53
CTTN-203ENST00000376561 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.34■□□□□ 0.534e-7■■■■■ 68.5
CTTN-203ENST00000376561 FBXW11Q9UKB1 542 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 PCDHB5Q9Y5E4 795 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 NDC80O14777 642 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 SHBGP04278 402 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 CLTBP09497 229 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 MYZAPP0CAP1 466 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 GJA8P48165 433 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 NR2C2P49116 596 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 GBE1Q04446 702 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 IFFO1Q0D2I5 559 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 SCAPQ12770 1279 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 NCBP2-AS2Q69YL0 99 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 ARMC5Q96C12 935 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 USP29Q9HBJ7 922 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 TMBIM4Q9HC24 238 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 ANLNQ9NQW6 1124 aa18.34■□□□□ 0.53
CTTN-203ENST00000376561 ZNF638Q14966 1978 aaKnown RBP18.33■□□□□ 0.53
CTTN-203ENST00000376561 I6L893 689 aaPredicted RBP18.33■□□□□ 0.53
CTTN-203ENST00000376561 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.53
CTTN-203ENST00000376561 NRLP54845 237 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.538e-7■■■■□ 23.8
CTTN-203ENST00000376561 SLC10A2Q12908 348 aaPredicted RBP18.33■□□□□ 0.53
CTTN-203ENST00000376561 TERF2Q15554 542 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 KCTD16Q68DU8 428 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 PCGF5Q86SE9 256 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 C8orf48Q96LL4 319 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 ARHGEF4Q9NR80 690 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 ETNK2Q9NVF9 386 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 SHOC2Q9UQ13 582 aa18.33■□□□□ 0.53
CTTN-203ENST00000376561 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.53
CTTN-203ENST00000376561 MYO16Q9Y6X6 1858 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 BCLAF3A2AJT9 711 aaKnown RBP18.33■□□□□ 0.52
CTTN-203ENST00000376561 H3BRJ5 948 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 DDR2Q16832 855 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 RTP2Q5QGT7 225 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 TAC4Q86UU9 113 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 ANKLE1Q8NAG6 615 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 DQX1Q8TE96 717 aaKnown RBP18.33■□□□□ 0.52
CTTN-203ENST00000376561 BCL7CQ8WUZ0 217 aaPredicted RBP18.33■□□□□ 0.52
CTTN-203ENST00000376561 WDCPQ9H6R7 721 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms