RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RHOCP08134 193 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 EPHB3P54753 998 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 OXCT1P55809 520 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 IFI35P80217 286 aaPredicted RBP18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 PTPN20Q4JDL3 420 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 ANKRD52Q8NB46 1076 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 CD99L2Q8TCZ2 262 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 CALML6Q8TD86 181 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 WNT8BQ93098 351 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 SNRNP25Q9BV90 132 aaKnown RBP18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 LRRC40Q9H9A6 602 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 AAR2Q9Y312 384 aaKnown RBP18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 PCDHB12Q9Y5F1 795 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 ARFGEF2Q9Y6D5 1785 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 RNF103O00237 685 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 MAGEA9P43362 315 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 RBBP7Q16576 425 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 ILDR2Q71H61 639 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 CIPCQ9C0C6 399 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 MANSC1Q9H8J5 431 aa18.52■□□□□ 0.56
PTPDC1-202ENST00000375360 MYL2P10916 166 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 NOS2P35228 1153 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 KCNA10Q16322 511 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 RABGAP1LQ5R372 815 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 NOL9Q5SY16 702 aaKnown RBP18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 FAM96AQ9H5X1 160 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 OR12D3Q9UGF7 316 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 TTLL13PA6NNM8 815 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 APOC4-APOC2K7ER74 178 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 RIPK2O43353 540 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 B4GALT4O60513 344 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 MSCO60682 206 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 CABYRO75952 493 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 FAM107AO95990 144 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 APOC2P02655 101 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 TMEM86AQ8N2M4 240 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 RIBC1Q8N443 379 aaPredicted RBP18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 KIF2BQ8N4N8 673 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 SNX19Q92543 992 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 CAVIN3Q969G5 261 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 USH1CQ9Y6N9 552 aa18.52■□□□□ 0.55
PTPDC1-202ENST00000375360 LRP6O75581 1613 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 SMIM35A0A1B0GVV1 85 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 CCDC22O60826 627 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 SOX11P35716 441 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 MAP2K2P36507 400 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 CPA2P48052 419 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 CUL3Q13618 768 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 TSHZ1Q6ZSZ6 1077 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 LRRC15Q8TF66 581 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 CAPNS2Q96L46 248 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 CPXM1Q96SM3 734 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 PADI3Q9ULW8 664 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 SETD1AO15047 1707 aaKnown RBP18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 VGLL3A8MV65 326 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 RAMP2O60895 175 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 RHOBTB1O94844 696 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 ZNF143P52747 638 aaPredicted RBP18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 TAF11Q15544 211 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 NOMO2Q5JPE7 1267 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 STRA8Q7Z7C7 330 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 PGBD3Q8N328 593 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 NDRG1Q92597 394 aaKnown RBP18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 APOL5Q9BWW9 433 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 PPCSQ9HAB8 311 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 PKP3Q9Y446 797 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 LCA5Q86VQ0 697 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 PHF13Q86YI8 300 aaPredicted RBP18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 HSFY1Q96LI6 401 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 ST6GALNAC4Q9H4F1 302 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 KCND1Q9NSA2 647 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 DMAC2Q9NW81 257 aa18.51■□□□□ 0.55
PTPDC1-202ENST00000375360 ATP5HO75947 161 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 ESRRBO95718 433 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 KLRC2P26717 231 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 TSPAN17Q96FV3 270 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 GBP5Q96PP8 586 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 PDZD7Q9H5P4 517 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 SHOC2Q9UQ13 582 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 PYGBP11216 843 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 IKBKEQ14164 716 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 PTAR1Q7Z6K3 402 aaPredicted RBP18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 HES6Q96HZ4 224 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 FAM129AQ9BZQ8 928 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 MARCH2Q9P0N8 246 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 DDR2Q16832 855 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 NUDT18Q6ZVK8 323 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 APTXQ7Z2E3 356 aaKnown RBP18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 CRLS1Q9UJA2 301 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 L3MBTL1Q9Y468 752 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 HIST1H2AGP0C0S8 130 aaPredicted RBP18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 HIST1H2ADP20671 130 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 EFTUD2Q15029 972 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 ARHGAP15Q53QZ3 475 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 C9orf57Q5W0N0 161 aa18.5■□□□□ 0.55
PTPDC1-202ENST00000375360 SLC26A11Q86WA9 606 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms