RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SLC1A5Q15758 541 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 NFIL3Q16649 462 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ASTE1Q2TB18 679 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CLEC4FQ8N1N0 589 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 INPP5DQ92835 1189 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 FDXACB1Q9BRP7 624 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SPON2Q9BUD6 331 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CCDC134Q9H6E4 229 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 COPS7BQ9H9Q2 264 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ERAP1Q9NZ08 941 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 EME2A4GXA9 379 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PROCP04070 461 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ACAT1P24752 427 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 HSD17B4P51659 736 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 DCAF4L1Q3SXM0 396 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 STKLD1Q8NE28 680 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SNX19Q92543 992 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 TLCD1Q96CP7 247 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 TMEM79Q9BSE2 394 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 APOL5Q9BWW9 433 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF518BQ9C0D4 1074 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 AVENQ9NQS1 362 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 RNF103O00237 685 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 ANPEPP15144 967 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PSMC3P17980 439 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 RPL22P35268 128 aaKnown RBP6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SPDYAQ5MJ70 313 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SLC41A1Q8IVJ1 513 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 CHST13Q8NET6 341 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 SPATA17Q96L03 361 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 UBXN6Q9BZV1 441 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 POMKQ9H5K3 350 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 THAP1Q9NVV9 213 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 PKD2L2Q9NZM6 624 aa6.74□□□□□ -1.33
SMC1A-202ENST00000375340 DCXO43602 365 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CSHL1Q14406 222 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ACAP1Q15027 740 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 STILQ15468 1287 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 TRMT5Q32P41 509 aaKnown RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 LACTB2Q53H82 288 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CYP4X1Q8N118 509 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 OR5B17Q8NGF7 314 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MKL1Q969V6 931 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CNPY3Q9BT09 278 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF229Q9UJW7 825 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PLCH1Q4KWH8 1693 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 TRPC5OSA6NMA1 111 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ITGAVP06756 1048 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CLK2P49760 499 aaKnown RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PEX5P50542 639 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CYP2R1Q6VVX0 501 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ADCK1Q86TW2 530 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 EDEM1Q92611 657 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 LRRC4CQ9HCJ2 640 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PRMT7Q9NVM4 692 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 E7ENQ6 273 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 TBC1D4O60343 1298 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ACADSBP45954 432 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MYBPC2Q14324 1141 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 POU6F1Q14863 301 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 GPR162Q16538 588 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PDK4Q16654 411 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ANKRD22Q5VYY1 191 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 GPR141Q7Z602 305 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 SNX32Q86XE0 403 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 UNC45BQ8IWX7 931 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 THAP11Q96EK4 314 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 TSPAN17Q96FV3 270 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 HSD17B14Q9BPX1 270 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 DDIT4Q9NX09 232 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PSMB4P28070 264 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 TMPRSS6Q8IU80 811 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MBOAT7Q96N66 472 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MAGEB5Q9BZ81 275 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 F7P08709 466 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 XRRA1Q6P2D8 792 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 NET1Q7Z628 596 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CNTNAP2Q9UHC6 1331 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 NRF1Q16656 503 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 NOTUMQ6P988 496 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MON1BQ7L1V2 547 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 KCNMB4Q86W47 210 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF212Q9UDV6 495 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 DYNC1LI2O43237 492 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 FAM200BP0CF97 657 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 FDX1P10109 184 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MRPS22P82650 360 aaKnown RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 TAF5Q15542 800 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 BOLA3Q53S33 107 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 EFHBQ8N7U6 833 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 MAN1C1Q9NR34 630 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 SLC12A4Q9UP95 1085 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 LRCH1Q9Y2L9 728 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PEX1O43933 1283 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 CLPTM1O96005 669 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 THRAP10827 490 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 GSTT1P30711 240 aa6.73□□□□□ -1.33
SMC1A-202ENST00000375340 PAN2Q504Q3 1202 aaKnown RBP6.73□□□□□ -1.33
SMC1A-202ENST00000375340 RNF220Q5VTB9 566 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms