RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PPARGP37231 505 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 FMO5P49326 533 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 ACOT2P49753 483 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 NEK2P51955 445 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SEPT6Q14141 434 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CNGA3Q16281 694 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 ZNF423Q2M1K9 1284 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 KCTD21Q4G0X4 260 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SAMD3Q8N6K7 520 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 HAUS8Q9BT25 410 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 GPR88Q9GZN0 384 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 INTS2Q9H0H0 1204 aaKnown RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 TOPORSQ9NS56 1045 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CHORDC1Q9UHD1 332 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 RAB26Q9ULW5 256 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 GPC6Q9Y625 555 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 A0A088AWK7 358 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CAPN8A6NHC0 703 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 CYP26A1O43174 497 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 IL1BP01584 269 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SRGAP2BP0DMP2 458 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 RAG1P15918 1043 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SLC1A1P43005 524 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 ZNF362Q5T0B9 420 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 GSTA5Q7RTV2 222 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 RAB3IL1Q8TBN0 382 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SLC20A1Q8WUM9 679 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 TARS2Q9BW92 718 aaKnown RBP12.57□□□□□ -0.4
C9orf3-203ENST00000375315 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 SLC17A7Q9P2U7 560 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 HESX1Q9UBX0 185 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 PADI4Q9UM07 663 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 DOLKQ9UPQ8 538 aa12.57□□□□□ -0.4
C9orf3-203ENST00000375315 FAM58BPP0C7Q3 252 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 OCM2P0CE71 109 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 OCMP0CE72 109 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 RFX1P22670 979 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 PHBP35232 272 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 ENTPD1P49961 510 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 CDK9P50750 372 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 PDIA2Q13087 525 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 APOFQ13790 326 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 IYDQ6PHW0 289 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 BTBD6Q96KE9 485 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 ACCSQ96QU6 501 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 GPR20Q99678 358 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 FAM213AQ9BRX8 229 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 NRBP2Q9NSY0 501 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 ANKEF1Q9NU02 776 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 KIAA1522Q9P206 1035 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 APPL1Q9UKG1 709 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 MKI67P46013 3256 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 ITM2AO43736 263 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 CCNT2O60583 730 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 DGAT1O75907 488 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 ATP5BP06576 529 aaKnown RBP12.56□□□□□ -0.4
C9orf3-203ENST00000375315 ZNF12P17014 697 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 CPNE8Q86YQ8 564 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 DCUN1D1Q96GG9 259 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
C9orf3-203ENST00000375315 DNAJC25-GNG10A0A024R161 153 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 I3L4J1 428 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 FOXN3O00409 490 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 TNPO2O14787 897 aaKnown RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 DNAJA2O60884 412 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 STBD1O95210 358 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 EDNRBP24530 442 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 PHKA2P46019 1235 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 ALDH1A3P47895 512 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 BCAP31P51572 246 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 BEX3Q00994 111 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 TGFBIQ15582 683 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CBWD6Q4V339 395 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CBWD3Q5JTY5 395 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CBWD5Q5RIA9 395 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 OGFRL1Q5TC84 451 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 ISLR2Q6UXK2 745 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 LPCAT2Q7L5N7 544 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 BANPQ8N9N5 519 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 RNF149Q8NC42 400 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CNBD2Q96M20 576 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 FAM49AQ9H0Q0 323 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 NRDE2Q9H7Z3 1164 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 RNF19AQ9NV58 838 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 ASB14A6NK59 587 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms