RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NUDT18Q6ZVK8 323 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ZBTB33Q86T24 672 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MXRA8Q9BRK3 442 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MTMR12Q9C0I1 747 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CHD2O14647 1828 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CLEC16AQ2KHT3 1053 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 RPS6KA4O75676 772 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CWF19L1Q69YN2 538 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MZT2AQ6P582 158 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CCDC36Q8IYA8 594 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ADCY6O43306 1168 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ITGA2P17301 1181 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 GSCP56915 257 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 SESN2P58004 480 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TRAP1Q12931 704 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TBCELQ5QJ74 424 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 PLA2G4FQ68DD2 849 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 SLC9A9Q8IVB4 645 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 GMCL1P1Q8NEA9 526 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 AGAP11Q8TF27 550 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 DCUN1D1Q96GG9 259 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ARMC7Q9H6L4 198 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 NBPF26B4DH59 902 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 NR3C2P08235 984 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 RFX5P48382 616 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 SULT1E1P49888 294 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MPP3Q13368 585 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CCDC85BQ15834 202 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF720Q7Z2F6 126 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 RASGEF1CQ8N431 466 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 NBPF15Q8N660 670 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MYDGFQ969H8 173 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TEX13BQ9BXU2 312 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 NMRAL1Q9HBL8 299 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 VTA1Q9NP79 307 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CPS1P31327 1500 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CLOCKO15516 846 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 CCDC142Q17RM4 750 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MTX3Q5HYI7 312 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ELMOD1Q8N336 334 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ETNPPLQ8TBG4 499 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 PACSIN1Q9BY11 444 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ACSS3Q9H6R3 686 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 LSM1O15116 133 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 RGS5O15539 181 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 VDRP11473 427 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 AIF1P55008 147 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 NUP93Q8N1F7 819 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 MIER2Q8N344 545 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 SPIRE2Q8WWL2 714 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 HOPXQ9BPY8 73 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 USP18Q9UMW8 372 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 UBA6A0AVT1 1052 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ALDH1A3P47895 512 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 BCAT1P54687 386 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TDRPQ86YL5 185 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 EXT2Q93063 718 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ASIC4Q96FT7 647 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 KCTD14Q9BQ13 255 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TBC1D10AQ9BXI6 508 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 EURLQ9NYK6 297 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 RAG1P15918 1043 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
PTCH1-204ENST00000375290 FAM220BPB1ANY3 271 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 ARIH2O95376 493 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 TTMPQ5BVD1 217 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 DNAJB7Q7Z6W7 309 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-204ENST00000375290 CENPLQ8N0S6 344 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-204ENST00000375290 C7orf26Q96N11 449 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 SEMA4AQ9H3S1 761 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 PP2D1A8MPX8 630 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 TCEA3O75764 348 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 ADSSP30520 456 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 GMCL1Q96IK5 515 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 PAIP1Q9H074 479 aaKnown RBP10.46□□□□□ -0.73
PTCH1-204ENST00000375290 KRT84Q9NSB2 600 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 RAPGEFL1Q9UHV5 662 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 GGT7Q9UJ14 662 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 NPHP3-ACAD11A0A0J9YXS1 232 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.73
PTCH1-204ENST00000375290 IMPDH2P12268 514 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 IYDQ6PHW0 289 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 SLC7A14Q8TBB6 771 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 TCP10LQ8TDR4 215 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF669Q96BR6 464 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-204ENST00000375290 IL22Q9GZX6 179 aa10.46□□□□□ -0.73
PTCH1-204ENST00000375290 RTN3O95197 1032 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 BMP10O95393 424 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 EPHB2P29323 1055 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 PRDX5P30044 214 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 RPL14P50914 215 aaKnown RBP10.46□□□□□ -0.74
PTCH1-204ENST00000375290 CPA5Q8WXQ8 436 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 REPS1Q96D71 796 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 C8orf37Q96NL8 207 aa10.46□□□□□ -0.74
PTCH1-204ENST00000375290 ZSCAN9O15535 394 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms