RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LPIN3Q9BQK8 851 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ZSWIM1Q9BR11 485 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CEP83Q9Y592 693 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CACNA1GO43497 2377 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ATG2BQ96BY7 2078 aa11.5□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DENND4CQ5VZ89 1909 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MOCS3O95396 460 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PDGFRBP09619 1106 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MYBL1P10243 752 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ODC1P11926 461 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ABCB4P21439 1286 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NOP2P46087 812 aaKnown RBP11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NOMO3P69849 1222 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CENPCQ03188 943 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CCINQ13939 588 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TCEAL1Q15170 157 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ARHGAP15Q53QZ3 475 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NAA35Q5VZE5 725 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 IL31Q6EBC2 164 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DNAJB7Q7Z6W7 309 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ACOT1Q86TX2 421 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 WDR5BQ86VZ2 330 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PASD1Q8IV76 773 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MCOLN2Q8IZK6 566 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SLC35F6Q8N357 371 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OR10T2Q8NGX3 314 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PSMG2Q969U7 264 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TNIP3Q96KP6 325 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ALS2CR12Q96Q35 445 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SEPT5Q99719 369 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 THAP2Q9H0W7 228 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 RXFP3Q9NSD7 469 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DSEQ9UL01 958 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 KIAA1549LQ6ZVL6 1849 aa11.49□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ZNF638Q14966 1978 aaKnown RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SCN1AP35498 2009 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GABRDO14764 452 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 AXIN1O15169 862 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 BUB1O43683 1085 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CYP11A1P05108 521 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CYP1A2P05177 515 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ATF6P18850 670 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LMO2P25791 158 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CDH5P33151 784 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 C1QBPQ07021 282 aaKnown RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ARHGAP17Q68EM7 881 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DENND1BQ6P3S1 775 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OSTM1Q86WC4 334 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ERICH1Q86X53 443 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PHF13Q86YI8 300 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 WDTC1Q8N5D0 677 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 C12orf50Q8NA57 414 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 BPIFB1Q8TDL5 484 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 WDR24Q96S15 920 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ARRDC1-AS1Q9H2J1 176 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SMOC1Q9H4F8 434 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DDX43Q9NXZ2 648 aaKnown RBP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 OBP2AQ9NY56 170 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ADAM22Q9P0K1 906 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CTTNBP2NLQ9P2B4 639 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MYO16Q9Y6X6 1858 aa11.48□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CFAP47Q6ZTR5 3102 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 IGF2RP11717 2491 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CTAGE9A4FU28 777 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 O00370 1275 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 RPP40O75818 363 aaKnown RBP11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 EPN2O95208 641 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 CALB1P05937 261 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PTPN1P18031 435 aaKnown RBP11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 TYMPP19971 482 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 HOXA6P31267 233 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ITPRIPL2Q3MIP1 535 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MGAT5BQ3V5L5 792 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 SLC39A12Q504Y0 691 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 PPP1R26Q5T8A7 1209 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 FSTL4Q6MZW2 842 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ITIH5Q86UX2 942 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 KBTBD6Q86V97 674 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 THEM5Q8N1Q8 247 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 C12orf29Q8N999 325 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 MSANTD4Q8NCY6 345 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GAB3Q8WWW8 586 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ZNF653Q96CK0 615 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 ARHGEF26Q96DR7 871 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 GCNAQ96QF7 691 aa11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 NAPGQ99747 312 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQA1-202ENST00000374949 DPEP3Q9H4B8 488 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms