RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TLR5O60602 858 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 F11P03951 625 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 KRT1P04264 644 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 RARAP10276 462 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 PYGMP11217 842 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 GBP1P32455 592 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 COPS2P61201 443 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 PPP2R5DQ14738 602 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 PPP2R5EQ16537 467 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 BRMS1LQ5PSV4 323 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 RSRC2Q7L4I2 434 aaKnown RBP17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 FAM131BQ86XD5 332 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 RCOR2Q8IZ40 523 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 CCDC185Q8N715 623 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 ADAM32Q8TC27 787 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 PPP2R3CQ969Q6 453 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 SNRNP25Q9BV90 132 aaKnown RBP17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 ZNF576Q9H609 170 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 ZWILCHQ9H900 591 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 PCSK1NQ9UHG2 260 aa17.92■□□□□ 0.46
HLA-DMA-201ENST00000374843 C3orf70A6NLC5 250 aaPredicted RBP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 PGRMC1O00264 195 aaKnown RBP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 PER2O15055 1255 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 ZRANB2O95218 330 aaKnown RBP eCLIP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 FGF19O95750 216 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 OLFM2O95897 454 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 OAS1P00973 400 aaKnown RBP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 IGLV3-27P01718 113 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 GJC1P36383 396 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 NRIP1P48552 1158 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 CKAP4Q07065 602 aaKnown RBP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 NME3Q13232 169 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 CLUL1Q15846 466 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 DPYSL2Q16555 572 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 SMTNL2Q2TAL5 461 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 PABPC1LQ4VXU2 614 aaKnown RBP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 HECTD3Q5T447 861 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 SEL1L2Q5TEA6 688 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 SND1Q7KZF4 910 aaKnown RBP eCLIP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 LEMD2Q8NC56 503 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 RAPGEF5Q92565 580 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 SLC39A13Q96H72 371 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 NSUN3Q9H649 340 aaKnown RBP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 CCSER2Q9H7U1 834 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 ASAH2Q9NR71 780 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 DZANK1Q9NVP4 752 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 ARHGEF38Q9NXL2 777 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 LMCD1Q9NZU5 365 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 FZD10Q9ULW2 581 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
HLA-DMA-201ENST00000374843 RFXAPO00287 272 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 PDE2AO00408 941 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 CCL16O15467 120 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 CEP104O60308 925 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 XYLBO75191 536 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 RFPL2O75678 378 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 PFKLP17858 780 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 CDC25CP30307 473 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 RING1Q06587 406 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 ZNF211Q13398 564 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 PDK2Q15119 407 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 TRIP4Q15650 581 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 ATP13A4Q4VNC1 1196 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 KCNT1Q5JUK3 1230 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 C10orf120Q5SQS8 335 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 ERMARDQ5T6L9 678 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 SCYL2Q6P3W7 929 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 TMEM184AQ6ZMB5 413 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 VN1R2Q8NFZ6 395 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 TSC1Q92574 1164 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 ZNF707Q96C28 371 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 KLHL11Q9NVR0 708 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 MARCH2Q9P0N8 246 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 DNMT3LQ9UJW3 386 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 AP4E1Q9UPM8 1137 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 EFR3BQ9Y2G0 817 aa17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 HBS1LQ9Y450 684 aaKnown RBP17.9■□□□□ 0.46
HLA-DMA-201ENST00000374843 LRRD1A4D1F6 860 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 I6L893 689 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 MSI1O43347 362 aaKnown RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 SLC2A3P11169 496 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 CCR1P32246 355 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 ADRA1BP35368 520 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 CDKN2BP42772 138 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 KPNA1P52294 538 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 ITIH3Q06033 890 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 EFEMP1Q12805 493 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 MFSD7Q6UXD7 560 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 SPOCD1Q6ZMY3 1216 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 GAREM2Q75VX8 874 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 HSPH1Q92598 858 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 ACSF2Q96CM8 615 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 FAF2Q96CS3 445 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 MS4A14Q96JA4 679 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 CAPZA3Q96KX2 299 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 FCRL2Q96LA5 508 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 NAP1L3Q99457 506 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 ZNF670Q9BS34 389 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms