RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CDO1Q16878 200 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 PPP1R26Q5T8A7 1209 aaPredicted RBP14.45□□□□□ -0.1
HMGCL-203ENST00000374490 SH3PXD2AQ5TCZ1 1133 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 OLFML2BQ68BL8 750 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 VPS52Q8N1B4 723 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 ZNF276Q8N554 614 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 SLC35F5Q8WV83 523 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 RSRC1Q96IZ7 334 aaKnown RBP14.45□□□□□ -0.1
HMGCL-203ENST00000374490 SNX27Q96L92 541 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 C16orf70Q9BSU1 422 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 POPDC2Q9HBU9 364 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 XAB2Q9HCS7 855 aaKnown RBP14.45□□□□□ -0.1
HMGCL-203ENST00000374490 ZC3H7BQ9UGR2 993 aaKnown RBP14.45□□□□□ -0.1
HMGCL-203ENST00000374490 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.45□□□□□ -0.1
HMGCL-203ENST00000374490 TTLL3Q9Y4R7 772 aa14.45□□□□□ -0.1
HMGCL-203ENST00000374490 A6NJR5 290 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 E7ENQ6 273 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 H3BRB1 525 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 COPEO14579 308 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 DNAJC6O75061 913 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 GCATO75600 419 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 KRT38O76015 456 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 IL4RP24394 825 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 RBL1P28749 1068 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 PTPN4P29074 926 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 CCNFP41002 786 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 ETV4P43268 484 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 RGS7P49802 495 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SARNPP82979 210 aaKnown RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 DPYSL2Q16555 572 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 WASHC2DQ5SRD0 308 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 BZW1Q7L1Q6 419 aaKnown RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SLC26A9Q7LBE3 791 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 LRRC6Q86X45 466 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 IGDCC3Q8IVU1 814 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 TAB3Q8N5C8 712 aaPredicted RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 PCDH19Q8TAB3 1148 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 RAB3IL1Q8TBN0 382 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 TBC1D31Q96DN5 1066 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 CFAP36Q96G28 342 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 DEFB118Q96PH6 123 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 TUT1Q9H6E5 874 aaKnown RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 NRDE2Q9H7Z3 1164 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 NPHS2Q9NP85 383 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 C15orf41Q9Y2V0 281 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 HACD1B0YJ81 288 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 XPOTO43592 962 aaKnown RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 NPTXRO95502 500 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 NEFHP12036 1026 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 CYP2F1P24903 491 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 ELF1P32519 619 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 BCAT1P54687 386 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 CDK18Q07002 472 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 BST2Q10589 180 aaKnown RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 DBN1Q16643 649 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 PMF1Q6P1K2 205 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SLC27A1Q6PCB7 646 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SH2D5Q6ZV89 423 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 ACOT1Q86TX2 421 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 TTC30AQ86WT1 665 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 CENPIQ92674 756 aaPredicted RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 ZNF560Q96MR9 790 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 QKIQ96PU8 341 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 PPP1R16BQ96T49 567 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 MRPL45Q9BRJ2 306 aaKnown RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 TLE6Q9H808 572 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 RCOR3Q9P2K3 495 aaPredicted RBP14.44□□□□□ -0.1
HMGCL-203ENST00000374490 GTF2IRD1Q9UHL9 959 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 SNX9Q9Y5X1 595 aa14.44□□□□□ -0.1
HMGCL-203ENST00000374490 GOLGA8RI6L899 631 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 DYNC1LI2O43237 492 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 PAPSS1O43252 624 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 CSDE1O75534 798 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 GRAP2O75791 330 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 HAUS5O94927 633 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 CD4P01730 458 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 LMNAP02545 664 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 APOEP02649 317 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 ATP5BP06576 529 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 CNTFP26441 200 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 TARSP26639 723 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 PNPLA4P41247 253 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 MAGEA3P43357 314 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 RPL34P49207 117 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 ARFIP2P53365 341 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 CDK16Q00536 496 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 PRKD1Q15139 912 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 ZBTB6Q15916 424 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 TAF1BQ53T94 588 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 PRAMEF19Q5SWL8 479 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 FAM91A1Q658Y4 838 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 TLDC1Q6P9B6 456 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 CYS1Q717R9 158 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 TLK2Q86UE8 772 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 PSTKQ8IV42 348 aaKnown RBP14.43□□□□□ -0.1
HMGCL-203ENST00000374490 HACE1Q8IYU2 909 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 ANKRD52Q8NB46 1076 aa14.43□□□□□ -0.1
HMGCL-203ENST00000374490 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms