RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 FNBP1LQ5T0N5 605 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 EXOC3L1Q86VI1 746 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 STMN4Q9H169 189 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TMEM161AQ9NX61 479 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 DTLQ9NZJ0 730 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TEX264Q9Y6I9 313 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TCRBV7S3A2A0A539 114 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 YJEFN3A6XGL0 299 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 E7ENQ6 273 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 SGK1O00141 431 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 DDHD2O94830 711 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 DESP17661 470 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TPSB2P20231 275 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TPSAB1Q15661 275 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 C1orf53Q5VUE5 145 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF534Q76KX8 674 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 GSTA5Q7RTV2 222 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 SSU72Q9NP77 194 aaKnown RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 ARHGEF4Q9NR80 690 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 ARHGEF38Q9NXL2 777 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 PAK5Q9P286 719 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TTC3P53804 2025 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 E7EVH7 732 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 NBNO60934 754 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 AP1G2O75843 785 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 AMHP03971 560 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 NRG1Q02297 640 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 VSTM1Q6UX27 236 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF317Q96PQ6 595 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 A0A087WUV0 522 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 SELPP16109 830 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 GNGT1P63211 74 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 CDO1Q16878 200 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 FAM71DQ8N9W8 422 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 ZSCAN18Q8TBC5 510 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 EIF2B3Q9NR50 452 aaKnown RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 KANSL3Q9P2N6 904 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 SLC24A2Q9UI40 661 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 RABGEF1Q9UJ41 708 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 STAP1Q9ULZ2 295 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 NYNRINQ9P2P1 1898 aaKnown RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 FKTNO75072 461 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 ZBED1O96006 694 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 VEGFBP49765 207 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 GAD2Q05329 585 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 KRT81Q14533 505 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 MANEALQ5VSG8 457 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 CYS1Q717R9 158 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 CDKL3Q8IVW4 592 aaPredicted RBP13.04□□□□□ -0.32
PRPF4-202ENST00000374199 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 MAGEB5Q9BZ81 275 aa13.04□□□□□ -0.32
PRPF4-202ENST00000374199 SYN3O14994 580 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 CDH16O75309 829 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 POMCP01189 267 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 IVLP07476 585 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 HTR7P34969 479 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 SULT1E1P49888 294 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 DYNLT1P63172 113 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 GUCY1A3Q02108 690 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 HIF1AQ16665 826 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 CENPUQ71F23 418 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 FUBP3Q96I24 572 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 KLC2Q9H0B6 622 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 TRPA1O75762 1119 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ADRA1BP35368 520 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 MAGEA11P43364 429 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 BRCC3P46736 316 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 BCAR1P56945 870 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 GBE1Q04446 702 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ODF2Q5BJF6 829 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 NOMO2Q5JPE7 1267 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF296Q8WUU4 475 aaPredicted RBP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 RSAD2Q8WXG1 361 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 NDRG1Q92597 394 aaKnown RBP13.03□□□□□ -0.32
PRPF4-202ENST00000374199 APBB2Q92870 758 aa13.03□□□□□ -0.32
PRPF4-202ENST00000374199 TRIM62Q9BVG3 475 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms