RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PTPN11Q06124 597 aaPredicted RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 STAT4Q14765 748 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 SLC10A6Q3KNW5 377 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 GLRA4Q5JXX5 417 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 LVRNQ6Q4G3 990 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 C3orf62Q6ZUJ4 267 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 PRPF39Q86UA1 669 aaKnown RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 RFX6Q8HWS3 928 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 ZBTB8OSQ8IWT0 167 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.65□□□□□ -1.35
CHD6-202ENST00000373222 KCTD6Q8NC69 237 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 AGAP11Q8TF27 550 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 SLC16A10Q8TF71 515 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 RSPH1Q8WYR4 309 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 MAGEB18Q96M61 343 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 FZD8Q9H461 694 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.65□□□□□ -1.35
CHD6-202ENST00000373222 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.35
CHD6-202ENST00000373222 NKIRAS1Q9NYS0 192 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 STRIP2Q9ULQ0 834 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 PHTF1Q9UMS5 762 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 GTF2A1LQ9UNN4 478 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 CHKBQ9Y259 395 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 MFHAS1Q9Y4C4 1052 aa6.65□□□□□ -1.35
CHD6-202ENST00000373222 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 SIGLEC16A6NMB1 481 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ACKR2O00590 384 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ALOX15BO15296 676 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 TYROBPO43914 113 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 UGT1A9O60656 530 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NBNO60934 754 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 SUN1O94901 812 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 C22orf31O95567 290 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 LSM8O95777 96 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 TNNC2P02585 160 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ITGAVP06756 1048 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 F7P08709 466 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 ARF4P18085 180 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 IGFBP6P24592 240 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 CDH5P33151 784 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 GPD2P43304 727 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 EFNA5P52803 228 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NDST1P52848 882 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 MYO1EQ12965 1108 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 BNIP1Q12981 228 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 PIGHQ14442 188 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 MTFR1Q15390 333 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ZNF667Q5HYK9 610 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NOL9Q5SY16 702 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 SCYL2Q6P3W7 929 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 CCDC62Q6P9F0 684 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ZNF449Q6P9G9 518 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 FAM183BPQ6ZVS7 135 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ILDR2Q71H61 639 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 RETREG3Q86VR2 466 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 SCUBE3Q8IX30 993 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NAT8LQ8N9F0 302 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 SPATA18Q8TC71 538 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 FBXO41Q8TF61 875 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 THAP3Q8WTV1 239 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 PYROXD1Q8WU10 500 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NKD2Q969F2 451 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 SKA1Q96BD8 255 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ANKRD36BP1Q96IX9 119 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 HEXIM2Q96MH2 286 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 PAFAH2Q99487 392 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NSRP1Q9H0G5 558 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 PDZD7Q9H5P4 517 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 RETREG1Q9H6L5 497 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 UGT1A7Q9HAW7 530 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 UGT1A10Q9HAW8 530 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 UGT1A8Q9HAW9 530 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 PCDH9Q9HC56 1237 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 XPO7Q9UIA9 1087 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 HAO1Q9UJM8 370 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 USP18Q9UMW8 372 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 SH3BP1Q9Y3L3 701 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 HEY1Q9Y5J3 304 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 SHROOM3Q8TF72 1996 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 CHUKO15111 745 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 B4GALT4O60513 344 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 CILPO75339 1184 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 PGRP06401 933 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 PFKMP08237 780 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 FAM200BP0CF97 657 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NQO1P15559 274 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 GMPRP36959 345 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ELK3P41970 407 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 PHKA2P46019 1235 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 HTR3AP46098 478 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 RABGGTBP53611 331 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 CDH6P55285 790 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 EIF3EP60228 445 aaKnown RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 COPS2P61201 443 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 ENPEPQ07075 957 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 SEPT6Q14141 434 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 MXD4Q14582 209 aaPredicted RBP6.64□□□□□ -1.35
CHD6-202ENST00000373222 MORF4L2Q15014 288 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 COX20Q5RI15 118 aa6.64□□□□□ -1.35
CHD6-202ENST00000373222 NXNQ6DKJ4 435 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms