RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 KRT7P08729 469 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 TBXAS1P24557 533 aaPredicted RBP16.37■□□□□ 0.21
PABPC4-202ENST00000372857 HSD17B4P51659 736 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 CLDN10P78369 228 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 HADHQ16836 314 aaKnown RBP16.37■□□□□ 0.21
PABPC4-202ENST00000372857 ATG14Q6ZNE5 492 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 DEFB132Q7Z7B7 95 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 TFB1MQ8WVM0 346 aaKnown RBP16.37■□□□□ 0.21
PABPC4-202ENST00000372857 CLMNQ96JQ2 1002 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 XPNPEP1Q9NQW7 623 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 GABBR1Q9UBS5 961 aa16.37■□□□□ 0.21
PABPC4-202ENST00000372857 DNAJA2O60884 412 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 SPAG6O75602 509 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 KRT38O76015 456 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 KLHL2O95198 593 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 MSX2P35548 267 aaPredicted RBP16.36■□□□□ 0.21
PABPC4-202ENST00000372857 SLC1A6P48664 564 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 ADARP55265 1226 aaKnown RBP16.36■□□□□ 0.21
PABPC4-202ENST00000372857 CXCL9Q07325 125 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 CCDC33Q8N5R6 958 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 NIPA2Q8N8Q9 360 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 TBC1D22BQ9NU19 505 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 SLC17A6Q9P2U8 582 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 TEDDM1Q5T9Z0 273 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 KLC3Q6P597 504 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 BTBD9Q96Q07 612 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 BLOC1S6Q9UL45 172 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 CNTN6Q9UQ52 1028 aa16.36■□□□□ 0.21
PABPC4-202ENST00000372857 DCXO43602 365 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 AP1G1O43747 822 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 TRPA1O75762 1119 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CRTAMO95727 393 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 OSBPP22059 807 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 ATXN3P54252 364 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PTPN20Q4JDL3 420 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PDPK2PQ6A1A2 396 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 DUS1LQ6P1R4 473 aaKnown RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 THNSL1Q8IYQ7 743 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 FBXW8Q8N3Y1 598 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PRPF31Q8WWY3 499 aaKnown RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 MRPL1Q9BYD6 325 aaKnown RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 POLR3FQ9H1D9 316 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 ITGA11Q9UKX5 1188 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 ZNF510Q9Y2H8 683 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PCDHGA4Q9Y5G9 962 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 E2F8A0AVK6 867 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 KCNN4O15554 427 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 HNRNPCP07910 306 aaKnown RBP eCLIP16.35■□□□□ 0.213e-7■■□□□ 12
PABPC4-202ENST00000372857 SRGAP2CP0DJJ0 459 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 SRGAP2BP0DMP2 458 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CD1EP15812 388 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 GMPRP36959 345 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 IDH3AP50213 366 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 ZNF132P52740 706 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 OGFRL1Q5TC84 451 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PPP1R2P3Q6NXS1 205 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 DLK2Q6UY11 383 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 UNC5AQ6ZN44 842 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 KBTBD6Q86V97 674 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 MAP7D3Q8IWC1 876 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 MARVELD2Q8N4S9 558 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CATSPER2Q96P56 530 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PNPLA8Q9NP80 782 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 MAN1C1Q9NR34 630 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 SEPT9Q9UHD8 586 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 SORCS3Q9UPU3 1222 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 EFR3BQ9Y2G0 817 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 HEMK1Q9Y5R4 338 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 GMEB1Q9Y692 573 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 AK5Q9Y6K8 562 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CASQ2O14958 399 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 APOEP02649 317 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 L1CAMP32004 1257 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CRHR1P34998 444 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 COG7P83436 770 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 MYBPC1Q00872 1141 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 RAB6CQ53S08 254 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CAND1Q86VP6 1230 aaKnown RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 UNC5BQ8IZJ1 945 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 PQLC1Q8N2U9 271 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 MPP5Q8N3R9 675 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 SYTL5Q8TDW5 730 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 CCDC97Q96F63 343 aaPredicted RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 IMPG2Q9BZV3 1241 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 RAB6CQ9H0N0 254 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 RBM38Q9H0Z9 239 aaKnown RBP16.35■□□□□ 0.21
PABPC4-202ENST00000372857 AP4B1Q9Y6B7 739 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
PABPC4-202ENST00000372857 A0A1B0GTW7 788 aa16.34■□□□□ 0.21
PABPC4-202ENST00000372857 CCDC166P0CW27 439 aa16.34■□□□□ 0.21
PABPC4-202ENST00000372857 MIPP30301 263 aa16.34■□□□□ 0.21
PABPC4-202ENST00000372857 PSMC1P62191 440 aaKnown RBP16.34■□□□□ 0.21
PABPC4-202ENST00000372857 TAP1Q03518 808 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms