RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 MYBL1P10243 752 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 NOS2P35228 1153 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 VITQ6UXI7 678 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 H2AFVQ71UI9 128 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 CD320Q9NPF0 282 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 COX16Q9P0S2 106 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 CFAP97Q9P2B7 532 aa17.04■□□□□ 0.32
TMEM53-203ENST00000372242 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 TRUB2O95900 331 aaKnown RBP17.03■□□□□ 0.32
TMEM53-203ENST00000372242 PDGFRAP16234 1089 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 GPC5P78333 572 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 GRM2Q14416 872 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 DCUN1D2Q6PH85 259 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 RXFP2Q8WXD0 754 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 ELSPBP1Q96BH3 223 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 TRIM7Q9C029 511 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 CALCOCO1Q9P1Z2 691 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 TFR2Q9UP52 801 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 C2CD4BA6NLJ0 364 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 EIF3CLB5ME19 914 aaKnown RBP17.03■□□□□ 0.32
TMEM53-203ENST00000372242 ECI2O75521 394 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 LCA5LO95447 670 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 ATP11AP98196 1134 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 SPA17Q15506 151 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 ZNF77Q15935 545 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 OTUD1Q5VV17 481 aaPredicted RBP17.03■□□□□ 0.32
TMEM53-203ENST00000372242 TBCBQ99426 244 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 NPY6RQ99463 290 aa17.03■□□□□ 0.32
TMEM53-203ENST00000372242 EIF3CQ99613 913 aaKnown RBP17.03■□□□□ 0.32
TMEM53-203ENST00000372242 DDX23Q9BUQ8 820 aaKnown RBP17.03■□□□□ 0.32
TMEM53-203ENST00000372242 MYO10Q9HD67 2058 aa17.02■□□□□ 0.32
TMEM53-203ENST00000372242 M0QYT0 321 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 STC2O76061 302 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 CYP1A2P05177 515 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.31
TMEM53-203ENST00000372242 MAGEA1P43355 309 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 SULT1E1P49888 294 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 COG7P83436 770 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 USP4Q13107 963 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 NME3Q13232 169 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 C15orf59Q2T9L4 293 aaPredicted RBP17.02■□□□□ 0.31
TMEM53-203ENST00000372242 RAB6CQ53S08 254 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 SH3PXD2AQ5TCZ1 1133 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 ARCQ7LC44 396 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 ACRBPQ8NEB7 543 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 BPIFB1Q8TDL5 484 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 CTNNBL1Q8WYA6 563 aaPredicted RBP17.02■□□□□ 0.31
TMEM53-203ENST00000372242 NT5C3BQ969T7 300 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 ZFYVE19Q96K21 471 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 DESI2Q9BSY9 194 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 RAB6CQ9H0N0 254 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 FAM204AQ9H8W3 233 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 KIF9Q9HAQ2 790 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 DDIT4Q9NX09 232 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 REXO2Q9Y3B8 237 aaKnown RBP17.02■□□□□ 0.31
TMEM53-203ENST00000372242 PCDHA13Q9Y5I0 950 aa17.02■□□□□ 0.31
TMEM53-203ENST00000372242 IGLV3-25P01717 112 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 TMEM253P0C7T8 217 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 OGDHQ02218 1023 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 CDO1Q16878 200 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 SLC25A52Q3SY17 297 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 CCDC14Q49A88 953 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 MFSD6LQ8IWD5 586 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 SLC44A3Q8N4M1 653 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 SERPINB11Q96P15 392 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 NUP85Q9BW27 656 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 OBP2AQ9NY56 170 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 IGSF9Q9P2J2 1179 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 STAP1Q9ULZ2 295 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 SCINQ9Y6U3 715 aa17.01■□□□□ 0.31
TMEM53-203ENST00000372242 TMEM191CA6NGB0 347 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 IRAK2O43187 625 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 GREM1O60565 184 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 KLKB1P03952 638 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 PSMC3P17980 439 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 GPD1P21695 349 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 SDC4P31431 198 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 ATXN1P54253 815 aaKnown RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 TBX4P57082 545 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 CCZ1BP86790 482 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 CCZ1P86791 482 aaPredicted RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 TRIP4Q15650 581 aaPredicted RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 RNF135Q8IUD6 432 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 GJD3Q8N144 294 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 CCDC112Q8NEF3 446 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 MRPL47Q9HD33 250 aaKnown RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 PIGVQ9NUD9 493 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 TLR6Q9Y2C9 796 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 HBS1LQ9Y450 684 aaKnown RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 IPO7O95373 1038 aaKnown RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 TCF3P15923 654 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 ZC3H12AQ5D1E8 599 aaKnown RBP17■□□□□ 0.31
TMEM53-203ENST00000372242 C10orf76Q5T2E6 689 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 DDX42Q86XP3 938 aaKnown RBP eCLIP17■□□□□ 0.31
TMEM53-203ENST00000372242 ASIC4Q96FT7 647 aa17■□□□□ 0.31
TMEM53-203ENST00000372242 BTBD6Q96KE9 485 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms