RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 HPCAP84074 193 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 E2F4Q16254 413 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 HSDL1Q3SXM5 330 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 PATL1Q86TB9 770 aaKnown RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 CEP41Q9BYV8 373 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 ECT2Q9H8V3 914 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 VANGL2Q9ULK5 521 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 FARP2O94887 1054 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 GJB1P08034 283 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 OCM2P0CE71 109 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 OCMP0CE72 109 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 CASP5P51878 434 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 CHI3L2Q15782 390 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 HECTD3Q5T447 861 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 MFSD4BQ5TF39 518 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 WDR59Q6PJI9 974 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 TMEM51Q9NW97 253 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 O00370 1275 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 HDCP19113 662 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 SOAT1P35610 550 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 ATXN3P54252 364 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 FNDC3BQ53EP0 1204 aaKnown RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 RD3Q7Z3Z2 195 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 SUSD6Q92537 303 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 HSD17B14Q9BPX1 270 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 CORO1BQ9BR76 489 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 SYTL2Q9HCH5 934 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 CDH9Q9ULB4 789 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 MRC1P22897 1456 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 PDZK1P1A8MUH7 402 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 ARIH2O95376 493 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 GRK3P35626 688 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 PGM1P36871 562 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
NDC1-201ENST00000371429 OTULINQ96BN8 352 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 NR1H4Q96RI1 486 aaPredicted RBP15.16■□□□□ 0.02
NDC1-201ENST00000371429 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 SNX5Q9Y5X3 404 aa15.16■□□□□ 0.02
NDC1-201ENST00000371429 IFRD1O00458 451 aaPredicted RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 RPL9P32969 192 aaKnown RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 POU6F1Q14863 301 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 C16orf59Q7L2K0 433 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 PTAR1Q7Z6K3 402 aaPredicted RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 WARS2Q9UGM6 360 aaKnown RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 PRLRP16471 622 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 NPR3P17342 541 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 POLR2EP19388 210 aaKnown RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 RFX8Q6ZV50 586 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 ZIM3Q96PE6 472 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 CCDC90BQ9GZT6 254 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 PABPC3Q9H361 631 aaKnown RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 COPS7BQ9H9Q2 264 aaPredicted RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 FAM105AQ9NUU6 356 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 SPG21Q9NZD8 308 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 NOP53Q9NZM5 478 aaKnown RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 CSH1P0DML2 217 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 CSH2P0DML3 217 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 SERPINB8P50452 374 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 KCNK10P57789 538 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 ITGB3BPQ13352 177 aaPredicted RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 INPP5AQ14642 412 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 TERF2Q15554 542 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 STRA8Q7Z7C7 330 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 C3orf20Q8ND61 904 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 ACTRT1Q8TDG2 376 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 WHRNQ9P202 907 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 C2CD2Q9Y426 696 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 TRAV19A0A0A6YYK7 116 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 EVPLLA8MZ36 301 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 KCNK1O00180 336 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 GLRA3O75311 464 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 FKBP9O95302 570 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 PAX3P23760 479 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 DLG4P78352 724 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 BTKQ06187 659 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 CDH17Q12864 832 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 CNGA2Q16280 664 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 FKBP9P1Q75LS8 142 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 ANO5Q75V66 913 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 ETNPPLQ8TBG4 499 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 UBA2Q9UBT2 640 aaPredicted RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 GGT7Q9UJ14 662 aa15.15■□□□□ 0.02
NDC1-201ENST00000371429 MRPL42Q9Y6G3 142 aaKnown RBP15.15■□□□□ 0.02
NDC1-201ENST00000371429 B4GALT5O43286 388 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 KRT16P08779 473 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 MIPP30301 263 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 NOS2P35228 1153 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 MPP3Q13368 585 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 WNT8BQ93098 351 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 LENG9Q96B70 501 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 SERPINB12Q96P63 405 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 MANSC1Q9H8J5 431 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms