RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 METTL3Q86U44 580 aaKnown RBP11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 UNC93AQ86WB7 457 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 NAXDQ8IW45 347 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 C1orf216Q8TAB5 229 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 ADAMTS14Q8WXS8 1223 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 DNASE2BQ8WZ79 361 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 PIWIL1Q96J94 861 aaKnown RBP11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 HNRNPABQ99729 332 aaKnown RBP11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 FBXO44Q9H4M3 255 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 IL21RQ9HBE5 538 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 PNPLA8Q9NP80 782 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 TLR8Q9NR97 1041 aaKnown RBP11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 WSB2Q9NYS7 404 aaPredicted RBP11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 SLC27A6Q9Y2P4 619 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 GPSM3Q9Y4H4 160 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 STON1Q9Y6Q2 735 aa11.64□□□□□ -0.55
EXOSC1-204ENST00000370902 H0Y626 953 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 PHACTR2O75167 634 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 TRIM16O95361 564 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 IGLV3-19P01714 112 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 HLA-DRAP01903 254 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 FAM200BP0CF97 657 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 RARGP13631 454 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 DEKP35659 375 aaKnown RBP11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 ATP5C1P36542 298 aaKnown RBP11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 KIF11P52732 1056 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 AP3M2P53677 418 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 AMPD3Q01432 767 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 SLC14A1Q13336 389 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 ZNF423Q2M1K9 1284 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 CCDC186Q7Z3E2 898 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 RABEPKQ7Z6M1 372 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 GLRX5Q86SX6 157 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 FAM217AQ8IXS0 508 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 HDDC3Q8N4P3 179 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 ZNF276Q8N554 614 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 PNPLA1Q8N8W4 532 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 BHMTQ93088 406 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 JAKMIP2Q96AA8 810 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 XPO6Q96QU8 1125 aaKnown RBP11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 PCDHA7Q9UN72 937 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 USP3Q9Y6I4 520 aa11.63□□□□□ -0.55
EXOSC1-204ENST00000370902 KALRNO60229 2985 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 KNL1Q8NG31 2342 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 CILPO75339 1184 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 PRKCHP24723 683 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 CD6P30203 668 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 AFMP43652 599 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 MCCD1P59942 119 aaPredicted RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 PPP3CAQ08209 521 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 SCAPQ12770 1279 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 PLEKHG6Q3KR16 790 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 PREPLQ4J6C6 727 aaPredicted RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 KIAA1324Q6UXG2 1013 aaKnown RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 SLCO6A1Q86UG4 719 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 ZCCHC9Q8N567 271 aaKnown RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 UBE2Q2Q8WVN8 375 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 TAF4BQ92750 862 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 TOE1Q96GM8 510 aaKnown RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 ITM2CQ9NQX7 267 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 WDR35Q9P2L0 1181 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 FNDC3AQ9Y2H6 1198 aaKnown RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 NFE2L3Q9Y4A8 694 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 PCDHA5Q9Y5H7 936 aa11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 SETXQ7Z333 2677 aaKnown RBP11.62□□□□□ -0.55
EXOSC1-204ENST00000370902 COL5A1P20908 1838 aaPredicted RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 K7ELQ4 463 aaPredicted RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 NR3C1P04150 777 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 SYPP08247 313 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 NCAM1P13591 858 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 TPMTP51580 245 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 ATXN3P54252 364 aaPredicted RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 PKP1Q13835 747 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 HNRNPDQ14103 355 aaKnown RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 ZNF234Q14588 700 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 SGSM1Q2NKQ1 1148 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 KMT5BQ4FZB7 885 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 PPP1R26Q5T8A7 1209 aaPredicted RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 TAS1R2Q8TE23 839 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 CYFIP2Q96F07 1278 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 NACA2Q9H009 215 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.61□□□□□ -0.559e-10■■■■■ 86.9
EXOSC1-204ENST00000370902 SERTAD1Q9UHV2 236 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 DNMT3LQ9UJW3 386 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 LSM7Q9UK45 103 aaKnown RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 CABIN1Q9Y6J0 2220 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 CFAP46Q8IYW2 2715 aa11.61□□□□□ -0.55
EXOSC1-204ENST00000370902 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
EXOSC1-204ENST00000370902 PDXKO00764 312 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms