RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SLC24A3Q9HC58 644 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 MROH7Q68CQ1 1323 aa20.22■□□□□ 0.83
LMO4-202ENST00000370544 PLA2G6O60733 806 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 UBA1P22314 1058 aaKnown RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 SCNN1BP51168 640 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 AQP5P55064 265 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 CCDC85BQ15834 202 aaPredicted RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 MRIQ9BWK5 157 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 CEP41Q9BYV8 373 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 SEMA4AQ9H3S1 761 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 HOXC6P09630 235 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 CPA3P15088 417 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 PTAR1Q7Z6K3 402 aaPredicted RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 SCUBE3Q8IX30 993 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 TEX9Q8N6V9 391 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 HAO1Q9UJM8 370 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 PCDHB12Q9Y5F1 795 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 TRPV2Q9Y5S1 764 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 ALOX15P16050 662 aaPredicted RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 BGNP21810 368 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 FSCN1Q16658 493 aaKnown RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 WLSQ5T9L3 541 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 CCDC60Q8IWA6 550 aaPredicted RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 TISP43B9A030 160 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 PSMD10O75832 226 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 SLC6A3Q01959 620 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 TP53BP2Q13625 1128 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 CATSPERGQ6ZRH7 1159 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 NT5DC3Q86UY8 548 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 HTR3CQ8WXA8 447 aa20.21■□□□□ 0.83
LMO4-202ENST00000370544 DMAP1Q9NPF5 467 aaPredicted RBP20.21■□□□□ 0.83
LMO4-202ENST00000370544 MAPK1P28482 360 aa20.2■□□□□ 0.83
LMO4-202ENST00000370544 ILDR2Q71H61 639 aa20.2■□□□□ 0.83
LMO4-202ENST00000370544 RIOX2Q8IUF8 465 aa20.2■□□□□ 0.83
LMO4-202ENST00000370544 TMEM134Q9H6X4 195 aa20.2■□□□□ 0.83
LMO4-202ENST00000370544 GOLGA8TH3BQL2 631 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 PSMA4P25789 261 aaKnown RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 CDH17Q12864 832 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 IQSEC1Q6DN90 963 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 TMEM154Q6P9G4 183 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 ADCK1Q86TW2 530 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 THAP11Q96EK4 314 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 TMEM120AQ9BXJ8 343 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 EFCAB1Q9HAE3 211 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 NAALADL1Q9UQQ1 740 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 DTNAQ9Y4J8 743 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 TFE3P19532 575 aaPredicted RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 EIF4BP23588 611 aaKnown RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 GRK2P25098 689 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 FAM171A1Q5VUB5 890 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 USP50Q70EL3 339 aaPredicted RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 ZFYVE19Q96K21 471 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 NFASCO94856 1347 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 O00370 1275 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 CKBP12277 381 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 MYL4P12829 197 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 PBLDP30039 288 aaPredicted RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 ELK3P41970 407 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 RPL21P46778 160 aaKnown RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 NR2C2P49116 596 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 MFSD7Q6UXD7 560 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 DEFB106AQ8N104 65 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 SERPINB11Q96P15 392 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 APPL1Q9UKG1 709 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 RAMP2O60895 175 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 TOMM70O94826 608 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 RARAP10276 462 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 EPB42P16452 691 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 AMPD1P23109 780 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 POU6F1Q14863 301 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 MEA1Q16626 185 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 TFAP2DQ7Z6R9 452 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 LPCAT1Q8NF37 534 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 RMND5AQ9H871 391 aa20.2■□□□□ 0.82
LMO4-202ENST00000370544 H2AFY2Q9P0M6 372 aaPredicted RBP20.2■□□□□ 0.82
LMO4-202ENST00000370544 RNASEH1O60930 286 aaKnown RBP20.19■□□□□ 0.82
LMO4-202ENST00000370544 MPOP05164 745 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 CCDC130P13994 396 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 VHLP40337 213 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 PRIM2P49643 509 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 TMC7Q7Z402 723 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 PLD3Q8IV08 490 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 TDRD5Q8NAT2 981 aaKnown RBP20.19■□□□□ 0.82
LMO4-202ENST00000370544 TLR10Q9BXR5 811 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 SLCO1B7G3V0H7 640 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 ELOVL4Q9GZR5 314 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 NCKIPSDQ9NZQ3 722 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 TUBP50607 506 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 CORO7P57737 925 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 NCALDP61601 193 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 MTA1Q13330 715 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 PPIL2Q13356 520 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 CELF3Q5SZQ8 465 aaKnown RBP20.19■□□□□ 0.82
LMO4-202ENST00000370544 SOX13Q9UN79 622 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 WDR27A2RRH5 827 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 PQBP1O60828 265 aaKnown RBP20.19■□□□□ 0.82
LMO4-202ENST00000370544 PGAM1P18669 254 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 RENBPP51606 427 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 PLIN5Q00G26 463 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 CYLC2Q14093 348 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms