RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 PDK2Q15119 407 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 FGD2Q7Z6J4 655 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 SMARCD1Q96GM5 515 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 UBE2OQ9C0C9 1292 aaKnown RBP8.79□□□□□ -1
ABCA4-201ENST00000370225 VPS33BQ9H267 617 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 IMPAD1Q9NX62 359 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 RAMP2O60895 175 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 CTSEP14091 401 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 NFIL3Q16649 462 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 LRRC8BQ6P9F7 803 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 BTN2A1Q7KYR7 527 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 ZNF720Q7Z2F6 126 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 GLT6D1Q7Z4J2 308 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 RSPH1Q8WYR4 309 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 LPPQ93052 612 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 CENPTQ96BT3 561 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 ZIM3Q96PE6 472 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 ILKAPQ9H0C8 392 aaPredicted RBP8.79□□□□□ -1
ABCA4-201ENST00000370225 SH3BP4Q9P0V3 963 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 VANGL2Q9ULK5 521 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 TRPV2Q9Y5S1 764 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 CEP170BQ9Y4F5 1589 aaPredicted RBP8.79□□□□□ -1
ABCA4-201ENST00000370225 A0A087X0T9 212 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 FOXP2O15409 715 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 SPAG6O75602 509 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 VIL1P09327 827 aaKnown RBP8.79□□□□□ -1
ABCA4-201ENST00000370225 FAM228BP0C875 321 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 S100A5P33763 92 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 TERF2Q15554 542 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 P3H2Q8IVL5 708 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.79□□□□□ -1
ABCA4-201ENST00000370225 CLIP3Q96DZ5 547 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 KRCC1Q9NPI7 259 aaPredicted RBP8.79□□□□□ -1
ABCA4-201ENST00000370225 MEGF6O75095 1541 aa8.79□□□□□ -1
ABCA4-201ENST00000370225 CATSPER1Q8NEC5 780 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 TADA1Q96BN2 335 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 PAWRQ96IZ0 340 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 DDX4Q9NQI0 724 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 PXDNLA1KZ92 1463 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SMNDC1O75940 238 aaKnown RBP eCLIP8.78□□□□□ -1
ABCA4-201ENST00000370225 ATP6V1C1P21283 382 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 STIP1P31948 543 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 TRIP10Q15642 601 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 EML3Q32P44 896 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 DNAL1Q4LDG9 190 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 MARC1Q5VT66 337 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SLC27A1Q6PCB7 646 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 TEX9Q8N6V9 391 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 GAD1Q99259 594 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 KIF2CQ99661 725 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 FBXO44Q9H4M3 255 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 RMND5AQ9H871 391 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 MRPL17Q9NRX2 175 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 CAB39Q9Y376 341 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 PCDHGA4Q9Y5G9 962 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 NCOA3Q9Y6Q9 1424 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 GJB6O95452 261 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CALCAP01258 141 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 GARTP22102 1010 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SERPINB10P48595 397 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 RAB27AP51159 221 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 BMPR2Q13873 1038 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 ARHGAP17Q68EM7 881 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SPOCD1Q6ZMY3 1216 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SEC16BQ96JE7 1060 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CDK5RAP1Q96SZ6 601 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 NDEL1Q9GZM8 345 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 ELOVL6Q9H5J4 265 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SOHLH2Q9NX45 425 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 MTO1Q9Y2Z2 717 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 FAM86B1E9PN63 330 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 FAM86B2P0C5J1 330 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 UBTFL6P0CB48 400 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 SLC2A4P14672 509 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 MAGEA9P43362 315 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SLC26A2P50443 739 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 YWHAZP63104 245 aaKnown RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 AASDHQ4L235 1098 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 SETMARQ53H47 684 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 CES5AQ6NT32 575 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CASKIN2Q8WXE0 1202 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 ABHD16BQ9H3Z7 469 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 BARX2Q9UMQ3 279 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 PCDHAC2Q9Y5I4 1007 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 LINC00854A0A1B0GVQ3 168 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 WDR27A2RRH5 827 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 C4orf22Q6V702 233 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CCNI2Q6ZMN8 369 aaPredicted RBP8.78□□□□□ -1
ABCA4-201ENST00000370225 FAM124AQ86V42 546 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 GPR152Q8TDT2 470 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 NACC2Q96BF6 587 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CCT8L2Q96SF2 557 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 KCNK16Q96T55 309 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 ACTR8Q9H981 624 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 SCN3BQ9NY72 215 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 CTNNAL1Q9UBT7 734 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 DCDC2Q9UHG0 476 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 KLF15Q9UIH9 416 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 HES2Q9Y543 173 aa8.78□□□□□ -1
ABCA4-201ENST00000370225 MTA2O94776 668 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms