RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TRPC4Q9UBN4 977 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CCDC154A6NI56 674 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 F5H5T6 163 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CLTBP09497 229 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PDK2Q15119 407 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PRMT9Q6P2P2 845 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 SVOPQ8N4V2 548 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 APOL4Q9BPW4 351 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 ADI1Q9BV57 179 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 VANGL2Q9ULK5 521 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 LRG1P02750 347 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PNPLA4P41247 253 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 OTUD3Q5T2D3 398 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-202ENST00000369984 TMEM121Q9BTD3 319 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 POLR1BQ9H9Y6 1135 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 S100A1P23297 94 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 TAF5Q15542 800 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 ATP8B4Q8TF62 1192 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 SEPT1Q8WYJ6 367 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 FRMD6Q96NE9 622 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PAIP1Q9H074 479 aaKnown RBP12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-202ENST00000369984 DUSP12Q9UNI6 340 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PNMA8CA0A1B0GUJ8 204 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PIK3CDO00329 1044 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 AKAP5P24588 427 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 TAB1Q15750 504 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■■■■ 33.4
HCFC1-202ENST00000369984 LNPEPQ9UIQ6 1025 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CRTAMO95727 393 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 RPN2P04844 631 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PTPN4P29074 926 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 GSSP48637 474 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 HK2P52789 917 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CCNJLQ8IV13 435 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 PAFAH2Q99487 392 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CYLDQ9NQC7 956 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 BGNP21810 368 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.364e-7■■■■□ 24.1
HCFC1-202ENST00000369984 BOLA3Q53S33 107 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 LRRC74BQ6ZQY2 392 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 REXO1L1PQ8IX06 675 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 LRRC40Q9H9A6 602 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 EIF2S3P41091 472 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 ALDH9A1P49189 494 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 PURAQ00577 322 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 FCHO2Q0JRZ9 810 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 PHACTR4Q8IZ21 702 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 LSM1O15116 133 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 INPP4BO15327 924 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 CACNA2D1P54289 1103 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 KIAA0408Q6ZU52 694 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 CDK20Q8IZL9 346 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 RORBQ92753 470 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 SF3B1O75533 1304 aaKnown RBP eCLIP12.78□□□□□ -0.362e-7■■■■■ 144.4
HCFC1-202ENST00000369984 UBOX5O94941 541 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 WARSP23381 471 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 CPT1AP50416 773 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 RIPOR1Q6ZS17 1223 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 NSUN4Q96CB9 384 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 F8VZ95 297 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 PABPC1P11940 636 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 C21orf59P57076 290 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 NR6A1Q15406 480 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 UBXN6Q9BZV1 441 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 GLP2RO95838 553 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 KCTD21Q4G0X4 260 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 MTMR12Q9C0I1 747 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
HCFC1-202ENST00000369984 ELP3Q9H9T3 547 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 DISP1Q96F81 1524 aa12.78□□□□□ -0.36
HCFC1-202ENST00000369984 TMEM114B3SHH9 223 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 MPOP05164 745 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 NUMBP49757 651 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 C18orf25Q96B23 403 aaPredicted RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 RMND5BQ96G75 393 aaPredicted RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 ANKRD27Q96NW4 1050 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 DRG1Q9Y295 367 aaKnown RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 RBP1P09455 135 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.36
HCFC1-202ENST00000369984 GRIK3Q13003 919 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 TRAF3Q13114 568 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 PLCL1Q15111 1095 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 CCDC153Q494R4 210 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 TSHZ1Q6ZSZ6 1077 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 OR6Y1Q8NGX8 325 aa12.77□□□□□ -0.36
HCFC1-202ENST00000369984 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms