RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 ZNF267Q14586 743 aaPredicted RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 HADHQ16836 314 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 MTERF2Q49AM1 385 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 ASRGL1Q7L266 308 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 GLYCTKQ8IVS8 523 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 GUF1Q8N442 669 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 TRUB1Q8WWH5 349 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 DGCR6LQ9BY27 220 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 THAP1Q9NVV9 213 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 KDM3AQ9Y4C1 1321 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SNAP23O00161 211 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 PRKAB2O43741 272 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 PSMB9P28065 219 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SOX11P35716 441 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 CASP2P42575 452 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 NT5C2P49902 561 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 RAB25P57735 213 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 KCNH2Q12809 1159 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 DPYSQ14117 519 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 BNIPLQ7Z465 357 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 FLAD1Q8NFF5 587 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SCFD2Q8WU76 684 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 C12orf43Q96C57 262 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 C9orf16Q9BUW7 83 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 MKRN2Q9H000 416 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 NUAK2Q9H093 628 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 FBXO6Q9NRD1 293 aaPredicted RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 CACNA2D2Q9NY47 1150 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 ING4Q9UNL4 249 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 ZC3H13Q5T200 1668 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 CRTAMO95727 393 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 FCGR1AP12314 374 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 INHBCP55103 352 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SNX16P57768 344 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 USP49Q70CQ1 688 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 NDUFAF2Q8N183 169 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 OTULINQ96BN8 352 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 PSTPIP2Q9H939 334 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 ZFYVE28Q9HCC9 887 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 RGS17Q9UGC6 210 aaPredicted RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 XDHP47989 1333 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 SLC4A1P02730 911 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 TMEM253P0C7T8 217 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ADSSP30520 456 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ARSEP51690 589 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 MYL7Q01449 175 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ILF2Q12905 390 aaKnown RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 KNOP1Q1ED39 458 aaKnown RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 FAM47CQ5HY64 1035 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 PDPK2PQ6A1A2 396 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 WDR59Q6PJI9 974 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 AMER2Q8N7J2 671 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 RAB2BQ8WUD1 216 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 FAM105AQ9NUU6 356 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 FIS1Q9Y3D6 152 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ATP10DQ9P241 1426 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 VWDEQ8N2E2 1590 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 WDR64B1ANS9 1081 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 HAT1O14929 419 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 CCNE2O96020 404 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ASNSP08243 561 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 SNRPAP09012 282 aaKnown RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 PCP11498 1178 aaKnown RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 CYP19A1P11511 503 aaPredicted RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ZNF23P17027 643 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ADRA1DP25100 572 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 MCAMP43121 646 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 DYNLL1P63167 89 aaKnown RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 BSPRYQ5W0U4 402 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 ERICH5Q6P6B1 374 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 RASSF6Q6ZTQ3 369 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 SLC13A5Q86YT5 568 aaPredicted RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 WDR19Q8NEZ3 1342 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 TCP10LQ8TDR4 215 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 HDAC11Q96DB2 347 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 CSRNP1Q96S65 589 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
PRDM1-201ENST00000369089 HERC2P3Q9BVR0 1158 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 SEMA6AQ9H2E6 1030 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 PADI4Q9UM07 663 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 SNX9Q9Y5X1 595 aa10.71□□□□□ -0.69
PRDM1-201ENST00000369089 PVALEFA0A1B0GWK0 134 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 CLDN3O15551 220 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 APOL3O95236 402 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 AKR1B1P15121 316 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 ACAT1P24752 427 aaKnown RBP10.71□□□□□ -0.7
PRDM1-201ENST00000369089 FASP25445 335 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 BTDP43251 543 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 PPP2R2BQ00005 443 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 SQLEQ14534 574 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 COL19A1Q14993 1142 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 SIGIRRQ6IA17 410 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 DCP2Q8IU60 420 aaKnown RBP10.71□□□□□ -0.7
PRDM1-201ENST00000369089 RHPN2Q8IUC4 686 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.7
PRDM1-201ENST00000369089 ZNF564Q8TBZ8 553 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms