RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ZDHHC11BP0C7U3 371 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 IL4RP24394 825 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 COILP38432 576 aaPredicted RBP24.83■■□□□ 1.57
SNX3-203ENST00000368979 CXCR3P49682 368 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 PSEN1P49768 467 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 SLC7A5Q01650 507 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 SCAPQ12770 1279 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 MMRN1Q13201 1228 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 SHHQ15465 462 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 WDR93Q6P2C0 686 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 TCEAL8Q8IYN2 117 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 FAF2Q96CS3 445 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 RUNDC3BQ96NL0 473 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 KCTD15Q96SI1 283 aaPredicted RBP24.83■■□□□ 1.57
SNX3-203ENST00000368979 DHX35Q9H5Z1 703 aaKnown RBP24.83■■□□□ 1.57
SNX3-203ENST00000368979 ALG13Q9NP73 1137 aaKnown RBP24.83■■□□□ 1.57
SNX3-203ENST00000368979 TLR8Q9NR97 1041 aaKnown RBP24.83■■□□□ 1.57
SNX3-203ENST00000368979 HOMER3Q9NSC5 361 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 CLIC5Q9NZA1 410 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.83■■□□□ 1.572e-14■□□□□ 10.5
SNX3-203ENST00000368979 STIM2Q9P246 746 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 PCYOX1Q9UHG3 505 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 FBXW11Q9UKB1 542 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 IRAK3Q9Y616 596 aa24.83■■□□□ 1.57
SNX3-203ENST00000368979 TUBBP07437 444 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 MYOGP15173 224 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 DHX34Q14147 1143 aaKnown RBP24.82■■□□□ 1.56
SNX3-203ENST00000368979 CCNG2Q16589 344 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 FAM109BQ6ICB4 259 aaPredicted RBP24.82■■□□□ 1.56
SNX3-203ENST00000368979 CCDC137Q6PK04 289 aaKnown RBP24.82■■□□□ 1.56
SNX3-203ENST00000368979 TMC7Q7Z402 723 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 MAATS1Q7Z4T9 603 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 ATG4AQ8WYN0 398 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 CASP10Q92851 521 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 RNF157Q96PX1 679 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 GBF1Q92538 1859 aa24.82■■□□□ 1.56
SNX3-203ENST00000368979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 GRXCR1A8MXD5 290 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 HEXIM1O94992 359 aaKnown RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 CXCL14O95715 111 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 GBP1P32455 592 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 ADRA1BP35368 520 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 ERVFC1P60507 584 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 UBE3AQ05086 875 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 SND1Q7KZF4 910 aaKnown RBP eCLIP24.81■■□□□ 1.56
SNX3-203ENST00000368979 RFX6Q8HWS3 928 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 SPPL3Q8TCT6 385 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 RNF139Q8WU17 664 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 TCF25Q9BQ70 676 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 MAGEB5Q9BZ81 275 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 ANLNQ9NQW6 1124 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 TMPRSS4Q9NRS4 437 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.81■■□□□ 1.56
SNX3-203ENST00000368979 I6L893 689 aaPredicted RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 TTI1O43156 1089 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 CST8O60676 142 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 CSH1P0DML2 217 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 CSH2P0DML3 217 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 H2AFXP16104 143 aaPredicted RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 HMGA1P17096 107 aaKnown RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 ELF1P32519 619 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 CA8P35219 290 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 PTGIRP43119 386 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 ALDH1A3P47895 512 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 VSNL1P62760 191 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 DR1Q01658 176 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 ANKRD20A8PQ5CZ79 823 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 PPP6R3Q5H9R7 873 aaPredicted RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 EFHC2Q5JST6 749 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 SPRED2Q7Z698 418 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 POF1BQ8WVV4 589 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 OVCA2Q8WZ82 227 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 KLHL5Q96PQ7 755 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 UBE2OQ9C0C9 1292 aaKnown RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 MAGED2Q9UNF1 606 aaPredicted RBP24.81■■□□□ 1.56
SNX3-203ENST00000368979 INSL5Q9Y5Q6 135 aa24.81■■□□□ 1.56
SNX3-203ENST00000368979 BHMG1C9JSJ3 638 aaPredicted RBP24.8■■□□□ 1.56
SNX3-203ENST00000368979 PRRG1O14668 218 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 RB1P06400 928 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 DNAJB1P25685 340 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 TFDP2Q14188 446 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 DRICH1Q6PGQ1 229 aaPredicted RBP24.8■■□□□ 1.56
SNX3-203ENST00000368979 PYROXD2Q8N2H3 581 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 SLCO2A1Q92959 643 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 MYRFLQ96LU7 910 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 SERPINB11Q96P15 392 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 WDCPQ9H6R7 721 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 ENTPD7Q9NQZ7 604 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 TMEM51Q9NW97 253 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 RCOR3Q9P2K3 495 aaPredicted RBP24.8■■□□□ 1.56
SNX3-203ENST00000368979 SFMBT1Q9UHJ3 866 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 NUDT5Q9UKK9 219 aa24.8■■□□□ 1.56
SNX3-203ENST00000368979 TNRC18O15417 2968 aaPredicted RBP24.8■■□□□ 1.56
SNX3-203ENST00000368979 FAM187AA6NFU0 413 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 TGM5O43548 720 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 ADH1AP07327 375 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 RARGP13631 454 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 DYNLT1P63172 113 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 TWF1Q12792 350 aa24.79■■□□□ 1.56
SNX3-203ENST00000368979 ARL13BQ3SXY8 428 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms