RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 KRT1P04264 644 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 RARAP10276 462 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 SLC2A3P11169 496 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PYGMP11217 842 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 EPCAMP16422 314 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 CDC25CP30307 473 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 CXCR3P49682 368 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PGFP49763 221 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PITX1P78337 314 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 MTA1Q13330 715 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 EIF4EBP2Q13542 120 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PDK2Q15119 407 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 SMTNL2Q2TAL5 461 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 KCNT1Q5JUK3 1230 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 BRMS1LQ5PSV4 323 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 C10orf120Q5SQS8 335 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 RBM23Q86U06 439 aaKnown RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 FAM131BQ86XD5 332 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 VSIG1Q86XK7 387 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 CCDC50Q8IVM0 306 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 LEMD2Q8NC56 503 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 KCTD6Q8NC69 237 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 CMASQ8NFW8 434 aaPredicted RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 ADAM32Q8TC27 787 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 RPGRIP1Q96KN7 1286 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 CAPZA3Q96KX2 299 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PEBP4Q96S96 227 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 WDCPQ9H6R7 721 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 WDR6Q9NNW5 1121 aaKnown RBP12.81□□□□□ -0.36
TUBE1-202ENST00000368662 ASAH2Q9NR71 780 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 PIGVQ9NUD9 493 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 COX16Q9P0S2 106 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 HCFC2Q9Y5Z7 792 aa12.81□□□□□ -0.36
TUBE1-202ENST00000368662 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 PER2O15055 1255 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 CCR1P32246 355 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ATP5C1P36542 298 aaKnown RBP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 SCAPQ12770 1279 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 TXNRD3NBQ6F5E7 133 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 CYP4V2Q6ZWL3 525 aaPredicted RBP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 MAIP1Q8WWC4 291 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 HSPH1Q92598 858 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 CASP10Q92851 521 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 RNF34Q969K3 372 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 GCNAQ96QF7 691 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 SNRNP25Q9BV90 132 aaKnown RBP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 NACA2Q9H009 215 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 LMCD1Q9NZU5 365 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 DNMT3LQ9UJW3 386 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 TLR6Q9Y2C9 796 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 LRRD1A4D1F6 860 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 FGGP02679 453 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 PTPN2P17706 415 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 PTPN7P35236 360 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 NRIP1P48552 1158 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 PPP2R5DQ14738 602 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 DPYSL2Q16555 572 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 RAB6CQ53S08 254 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 TFDP3Q5H9I0 405 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 EFHC2Q5JST6 749 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 RAB6CQ9H0N0 254 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.8□□□□□ -0.36
TUBE1-202ENST00000368662 MARCH2Q9P0N8 246 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 SFMBT1Q9UHJ3 866 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 FZD10Q9ULW2 581 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 AP4E1Q9UPM8 1137 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 EFR3BQ9Y2G0 817 aa12.8□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF487B1APH4 448 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CCL16O15467 120 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 F11P03951 625 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 SRGAP2BP0DMP2 458 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 PFKLP17858 780 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 KDELR1P24390 212 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ADRA1BP35368 520 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF135P52742 658 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CDH6P55285 790 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ITIH3Q06033 890 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 RING1Q06587 406 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 EFEMP1Q12805 493 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 KRT81Q14533 505 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ACBD5Q5T8D3 534 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF572Q7Z3I7 529 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 TMC8Q8IU68 726 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 MRPS31Q92665 395 aaKnown RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 NSUN3Q9H649 340 aaKnown RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 IL21Q9HBE4 155 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 DZANK1Q9NVP4 752 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 RASAL2Q9UJF2 1139 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 HBS1LQ9Y450 684 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms