RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CLLU1OSQ5K130 101 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 HHATQ5VTY9 493 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 TRAF7Q6Q0C0 670 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 TRMT10CQ7L0Y3 403 aaKnown RBP11.08□□□□□ -0.64
TPM3-212ENST00000368533 PIGZQ86VD9 579 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 DCLK3Q9C098 648 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
TPM3-212ENST00000368533 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
TPM3-212ENST00000368533 CEP290O15078 2479 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SZT2Q5T011 3432 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 IFNB1P01574 187 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 PTPN1P18031 435 aaKnown RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 MIPP30301 263 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 NUMBP49757 651 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 TCEAL1Q15170 157 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 UPP1Q16831 310 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 XKR4Q5GH76 650 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 PPP6R3Q5H9R7 873 aaPredicted RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SPATA21Q7Z572 469 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 EXOC3L1Q86VI1 746 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SRRM1Q8IYB3 904 aaKnown RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 GPR152Q8TDT2 470 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 FAM210AQ96ND0 272 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 PEBP4Q96S96 227 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 OSBPL8Q9BZF1 889 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 LHX5Q9H2C1 402 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 WHRNQ9P202 907 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 MYO7AQ13402 2215 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SCN5AQ14524 2016 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 ETS1P14921 441 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 BRAFP15056 766 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SLC1A1P43005 524 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 IZUMO3Q5VZ72 239 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 HFE2Q6ZVN8 426 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 MFN1Q8IWA4 741 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 VCPIP1Q96JH7 1222 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 ZNF317Q96PQ6 595 aaPredicted RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 ADAM7Q9H2U9 754 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 FGFR1OP2Q9NVK5 253 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 DLGAP2Q9P1A6 1054 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 NUDT5Q9UKK9 219 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SIGLEC16A6NMB1 481 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 CABYRO75952 493 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 ZSCAN5DPP0CG00 497 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 BDNFP23560 247 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 CCND1P24385 295 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 CDH5P33151 784 aaPredicted RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 RIPK1Q13546 671 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 DSC3Q14574 896 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 GPNMBQ14956 572 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 TRIM60Q495X7 471 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 TMEM154Q6P9G4 183 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 ARHGAP22Q7Z5H3 698 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 SLC35F5Q8WV83 523 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 ATXN2LQ8WWM7 1075 aaKnown RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 CCDC77Q9BR77 488 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 PRDM5Q9NQX1 630 aaPredicted RBP11.07□□□□□ -0.64
TPM3-212ENST00000368533 CHST12Q9NRB3 414 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 TMLHEQ9NVH6 421 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 STRIP2Q9ULQ0 834 aa11.07□□□□□ -0.64
TPM3-212ENST00000368533 XIRP2A4UGR9 3374 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 TTC36A6NLP5 189 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 TTC4O95801 387 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 STX2P32856 288 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 P3H1Q32P28 736 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 GLB1LQ6UWU2 654 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 PAQR9Q6ZVX9 377 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 GLIS1Q8NBF1 620 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 CENPTQ96BT3 561 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 TRAIPQ9BWF2 469 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 TRIM4Q9C037 500 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.06□□□□□ -0.64
TPM3-212ENST00000368533 POC1B-GALNT4F8VUJ3 575 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 SOAT2O75908 522 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 ATP5DP30049 168 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 MAN1A1P33908 653 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 PNPLA4P41247 253 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 MSH2P43246 934 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 NME3Q13232 169 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 TMED2Q15363 201 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 CA9Q16790 459 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 NPNTQ6UXI9 565 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 FAM126BQ8IXS8 530 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 CCDC89Q8N998 374 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 KCTD6Q8NC69 237 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 FAM172AQ8WUF8 416 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 UCMAQ8WVF2 138 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 EDEM1Q92611 657 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 GORASP1Q9BQQ3 440 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM3-212ENST00000368533 SLC38A7Q9NVC3 462 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 GDAP2Q9NXN4 497 aa11.06□□□□□ -0.64
TPM3-212ENST00000368533 NKIRAS1Q9NYS0 192 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms