RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 F9P00740 461 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 NEFHP12036 1026 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 RBL1P28749 1068 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 LHX1P48742 406 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 GLUD2P49448 558 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 ADAM17P78536 824 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 MAP2K5Q13163 448 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 SNX17Q15036 470 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TAF5Q15542 800 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 SLC1A5Q15758 541 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 SPRED3Q2MJR0 410 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 KBTBD12Q3ZCT8 623 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 ARMC3Q5W041 872 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 STEAP4Q687X5 459 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 OLFML2BQ68BL8 750 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 CGB2Q6NT52 195 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TRNP1Q6NT89 227 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 DLK2Q6UY11 383 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 FAM47EQ6ZV65 393 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TBC1D1Q86TI0 1168 aaPredicted RBP10.58□□□□□ -0.72
TPM3-209ENST00000368527 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 C2orf69Q8N8R5 385 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 C12orf29Q8N999 325 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TCP10LQ8TDR4 215 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 C10orf82Q8WW14 230 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 BRI3BPQ8WY22 251 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 ATP2A3Q93084 1043 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 NTAN1Q96AB6 310 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TTC17Q96AE7 1141 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 SPATA13Q96N96 652 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 ZMAT2Q96NC0 199 aaKnown RBP10.58□□□□□ -0.72
TPM3-209ENST00000368527 PPP1R2P1Q96PQ5 205 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 CSPG4P5Q96PW8 444 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TSSK1BQ9BXA7 367 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 POPDC2Q9HBU9 364 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 CHST12Q9NRB3 414 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 PIN4Q9Y237 131 aaKnown RBP10.58□□□□□ -0.72
TPM3-209ENST00000368527 TTLL3Q9Y4R7 772 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
TPM3-209ENST00000368527 EVPLQ92817 2033 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 TCRBV7S3A2A0A539 114 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 C17orf102A2RUQ5 167 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 SDR42E2A6NKP2 422 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 C9IYK1 514 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 M0QZ92 97 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
TPM3-209ENST00000368527 DYNC1LI2O43237 492 aaPredicted RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 PSMD3O43242 534 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 CSDE1O75534 798 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 APRTP07741 180 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 NPR3P17342 541 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 HTR7P34969 479 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 CRHR1P34998 444 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 GJA9P57773 515 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 ZNF33AQ06730 810 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 KRT72Q14CN4 511 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 PAFAH1B3Q15102 231 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 ARL13BQ3SXY8 428 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 PPP6R3Q5H9R7 873 aaPredicted RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 WASHC2DQ5SRD0 308 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 HP1BP3Q5SSJ5 553 aaPredicted RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 GJC2Q5T442 439 aaPredicted RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 LRRC8BQ6P9F7 803 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 NPNTQ6UXI9 565 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 KYAT3Q6YP21 454 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 CAPN12Q6ZSI9 719 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 MARK2Q7KZI7 788 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 OTOAQ7RTW8 1153 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 CAND1Q86VP6 1230 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 SIX6OS1Q8N1H7 587 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 ARHGAP24Q8N264 748 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 C7orf31Q8N865 590 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 B3GALNT2Q8NCR0 500 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 KBTBD7Q8WVZ9 684 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 HTR3CQ8WXA8 447 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 NT5C3BQ969T7 300 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 ZBTB10Q96DT7 871 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 RMDN2Q96LZ7 410 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 C7orf26Q96N11 449 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 OLFM3Q96PB7 478 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 SLC2A13Q96QE2 648 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 EIF2AQ9BY44 585 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 FAM49AQ9H0Q0 323 aaPredicted RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 STN1Q9H668 368 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 YY1AP1Q9H869 796 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 LRRC4Q9HBW1 653 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 FAM49BQ9NUQ9 324 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 NOP53Q9NZM5 478 aaKnown RBP10.57□□□□□ -0.72
TPM3-209ENST00000368527 FZD10Q9ULW2 581 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 SORCS3Q9UPU3 1222 aa10.57□□□□□ -0.72
TPM3-209ENST00000368527 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms