RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ZDHHC11BP0C7U3 371 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 PSMC3P17980 439 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 SDC4P31431 198 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
EFNA1-201ENST00000368406 VIPR2P41587 438 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 SULT1E1P49888 294 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 TUBP50607 506 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
EFNA1-201ENST00000368406 CCZ1BP86790 482 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
EFNA1-201ENST00000368406 PFKPQ01813 784 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 SNX30Q5VWJ9 437 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 VITQ6UXI7 678 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 BHLHA9Q7RTU4 235 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 DEFB106AQ8N104 65 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 EMC1Q8N766 993 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
EFNA1-201ENST00000368406 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
EFNA1-201ENST00000368406 TRMT61BQ9BVS5 477 aaKnown RBP13.22□□□□□ -0.29
EFNA1-201ENST00000368406 PLA2G2FQ9BZM2 168 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 TRPV5Q9NQA5 729 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 OSER1Q9NX31 292 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 COX16Q9P0S2 106 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 NAALADL1Q9UQQ1 740 aa13.22□□□□□ -0.29
EFNA1-201ENST00000368406 NUP210Q8TEM1 1887 aaPredicted RBP13.21□□□□□ -0.29
EFNA1-201ENST00000368406 HEPACAM2A8MVW5 462 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 DPYSL4O14531 572 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 ZNF263O14978 683 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 COCHO43405 550 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 LCA5LO95447 670 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 CCDC175P0C221 793 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 IRF1P10914 325 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 HDCP19113 662 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 GPD1P21695 349 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 PGFP49763 221 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 NAP1L1P55209 391 aaKnown RBP13.21□□□□□ -0.3
EFNA1-201ENST00000368406 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 SND1Q7KZF4 910 aaKnown RBP eCLIP13.21□□□□□ -0.32e-9■■■■□ 20
EFNA1-201ENST00000368406 CELF5Q8N6W0 485 aaKnown RBP13.21□□□□□ -0.3
EFNA1-201ENST00000368406 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.3
EFNA1-201ENST00000368406 JOSD2Q8TAC2 188 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.3
EFNA1-201ENST00000368406 PBXIP1Q96AQ6 731 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 ARHGEF26Q96DR7 871 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.3
EFNA1-201ENST00000368406 LRFN3Q9BTN0 628 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 TDP1Q9NUW8 608 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 SMPD4Q9NXE4 827 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 ANAPC7Q9UJX3 599 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 FBXL21Q9UKT6 434 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 INTUQ9ULD6 942 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 NENFQ9UMX5 172 aa13.21□□□□□ -0.3
EFNA1-201ENST00000368406 FAM86C2PA6NEL3 165 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 MDM4O15151 490 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 PRAMEF12O95522 483 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 OAS1P00973 400 aaKnown RBP13.2□□□□□ -0.3
EFNA1-201ENST00000368406 CYP1A2P05177 515 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 HMBSP08397 361 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 PDGFRAP16234 1089 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 GBP1P32455 592 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 NOS2P35228 1153 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 MATKP42679 507 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
EFNA1-201ENST00000368406 VAV2P52735 878 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 NME3Q13232 169 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 MAMLD1Q13495 774 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 CDO1Q16878 200 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 PLEKHA7Q6IQ23 1121 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 RXFP2Q8WXD0 754 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 DNASE1L2Q92874 299 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 IRF7Q92985 503 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 USP13Q92995 863 aaPredicted RBP13.2□□□□□ -0.3
EFNA1-201ENST00000368406 RNF34Q969K3 372 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 RSPRY1Q96DX4 576 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 CFAP57Q96MR6 1250 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 SERPINB11Q96P15 392 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 CYP2S1Q96SQ9 504 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 SMG9Q9H0W8 520 aaKnown RBP13.2□□□□□ -0.3
EFNA1-201ENST00000368406 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 RRN3Q9NYV6 651 aa13.2□□□□□ -0.3
EFNA1-201ENST00000368406 SLC12A8A0AV02 714 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 M0QYT0 321 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 CHADO15335 359 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 OLFM2O95897 454 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 TBX18O95935 607 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 TCF3P15923 654 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 PSMA2P25787 234 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
EFNA1-201ENST00000368406 FLT3P36888 993 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 ATP11AP98196 1134 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 KIF5AQ12840 1032 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
EFNA1-201ENST00000368406 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms