RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 GBP7Q8N8V2 638 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 APPL1Q9UKG1 709 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 DRG1Q9Y295 367 aaKnown RBP11.08□□□□□ -0.64
PTPRK-205ENST00000368213 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 CDY1Q9Y6F8 540 aa11.08□□□□□ -0.64
PTPRK-205ENST00000368213 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 SLIT2O94813 1529 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 A8MX80 341 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 F8VZ95 297 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 DCTN3O75935 186 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 GLP2RO95838 553 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 DNTTP04053 509 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 SNRPD1P62314 119 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 FAM83EQ2M2I3 478 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 POM121L1PQ3SYA9 428 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 TAGAPQ8N103 731 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 B3GALNT2Q8NCR0 500 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 OSCP1Q8WVF1 389 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 FAR2Q96K12 515 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 C9orf72Q96LT7 481 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 MRPL40Q9NQ50 206 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 UBP1Q9NZI7 540 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ADA2Q9NZK5 511 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 TRAF3IP3Q9Y228 551 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 CAPN7Q9Y6W3 813 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 F8VP50 259 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ZSCAN9O15535 394 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 NDUFB5O43674 189 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 AMD1P17707 334 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 JADE3Q92613 823 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 SPACA7Q96KW9 195 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 FRMD8Q9BZ67 464 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ABCG4Q9H172 646 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 RNF186Q9NXI6 227 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 STX18Q9P2W9 335 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 DCTN4Q9UJW0 460 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 TARSL2A2RTX5 802 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ARVCFO00192 962 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ANGPT2O15123 496 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 GZMAP12544 262 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 YBX3P16989 372 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■□□□□ 10.6
PTPRK-205ENST00000368213 TNNI3P19429 210 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 CYP3A7P24462 503 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 PLA2G4AP47712 749 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 NCALDP61601 193 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 C3orf62Q6ZUJ4 267 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 C1orf186Q6ZWK4 172 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 HJURPQ8NCD3 748 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 OTULINQ96BN8 352 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 FAM136AQ96C01 138 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ALG13Q9NP73 1137 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 RRAGDQ9NQL2 400 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 SLC45A1Q9Y2W3 748 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 MAGOHP61326 146 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 MTSS1LQ765P7 747 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 GPR152Q8TDT2 470 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 INPP4AQ96PE3 977 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 NR1H4Q96RI1 486 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 TSPAN18Q96SJ8 248 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 C2CD2Q9Y426 696 aa11.07□□□□□ -0.64
PTPRK-205ENST00000368213 CICQ96RK0 1608 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-205ENST00000368213 GCNT1Q02742 428 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 DUSP4Q13115 394 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 HIPK4Q8NE63 616 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 VPS37AQ8NEZ2 397 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 FLCNQ8NFG4 579 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TEKT2Q9UIF3 430 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 PCDHA2Q9Y5H9 948 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 NCF1BA6NI72 391 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 NCF1CA8MVU1 366 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 NCF1P14598 390 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 SMARCB1Q12824 385 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TTI2Q6NXR4 508 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 NAT16Q8N8M0 369 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 FAM167BQ9BTA0 163 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TRABDQ9H4I3 376 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 RIC8BQ9NVN3 520 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 RBPJLQ9UBG7 517 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 MRFAP1Q9Y605 127 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 TISP43B9A030 160 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 RPN2P04844 631 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 PYGBP11216 843 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ATP6V1E1P36543 226 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 KCNJ1P48048 391 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 OTUD4Q01804 1114 aaKnown RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 CENPPQ6IPU0 288 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ARHGEF19Q8IW93 802 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ZNF296Q8WUU4 475 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-205ENST00000368213 KLHL29Q96CT2 875 aa11.06□□□□□ -0.64
PTPRK-205ENST00000368213 ZSWIM1Q9BR11 485 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms