RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 NAALADL1Q9UQQ1 740 aa13.67□□□□□ -0.22
PTPRK-204ENST00000368210 M0R3G1 203 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 ETFBP38117 255 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 MAGEA8P43361 318 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 TUBA4AP68366 448 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 SLC26A11Q86WA9 606 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 LNX1Q8TBB1 728 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 PRPF18Q99633 342 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 MUC3BQ9H195 1237 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 DTNAQ9Y4J8 743 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 ENO3P13929 434 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 LHX1P48742 406 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 RAB14P61106 215 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 PTK6Q13882 451 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 PAIP1Q9H074 479 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 RXFP1Q9HBX9 757 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 VAV3Q9UKW4 847 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 HARS2P49590 506 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 LBRQ14739 615 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 TTC23LQ6PF05 361 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 SHC3Q92529 594 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 LTN1O94822 1766 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 LOC100653049A0A140TA62 436 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 ANGPT2O15123 496 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 KRT34O76011 436 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 GJB6O95452 261 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 ATP1A4Q13733 1029 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 EIF1ADQ8N9N8 165 aaKnown RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 DNAJB3Q8WWF6 145 aa13.66□□□□□ -0.22
PTPRK-204ENST00000368210 RPRD1AQ96P16 312 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-204ENST00000368210 SMIM31A0A1B0GVY4 71 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 GLRA3O75311 464 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 CYP2F1P24903 491 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 ARHGDIAP52565 204 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 SLC34A1Q06495 639 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 TWF1Q12792 350 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 TBCCQ15814 346 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 CCDC153Q494R4 210 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 ARMC3Q5W041 872 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 PLEKHA7Q6IQ23 1121 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 IRF2BP2Q7Z5L9 587 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 ATP6V0D2Q8N8Y2 350 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 LRRC40Q9H9A6 602 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 REXO2Q9Y3B8 237 aaKnown RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 MICAL2O94851 1124 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 AKAP5P24588 427 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 TKTL1P51854 596 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 GEMP55040 296 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 FAM117BQ6P1L5 589 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 NLRP9Q7RTR0 991 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 TMEM139Q8IV31 216 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 SHCBP1Q8NEM2 672 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 MRPL1Q9BYD6 325 aaKnown RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 CHST7Q9NS84 486 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 DNPEPQ9ULA0 475 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 ASNA1O43681 348 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 PLA2G6O60733 806 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 DDHD2O94830 711 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 C21orf59P57076 290 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 PRPF39Q86UA1 669 aaKnown RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 NT5DC4Q86YG4 428 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 MIB1Q86YT6 1006 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 RNPEPL1Q9HAU8 725 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 MOSPD1Q9UJG1 213 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 BLOC1S6Q9UL45 172 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 GMEB1Q9Y692 573 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 AIM2O14862 343 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 PYGLP06737 847 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 MARSP56192 900 aaKnown RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 MRGBPQ9NV56 204 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 HEY2Q9UBP5 337 aa13.65□□□□□ -0.22
PTPRK-204ENST00000368210 AAR2Q9Y312 384 aaKnown RBP13.65□□□□□ -0.22
PTPRK-204ENST00000368210 NFASCO94856 1347 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 F8VP50 259 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 HNRNPRO43390 633 aaKnown RBP13.64□□□□□ -0.23
PTPRK-204ENST00000368210 DLGAP3O95886 979 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 HMGCRP04035 888 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 CPA2P48052 419 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 ERMARDQ5T6L9 678 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
PTPRK-204ENST00000368210 RINLQ6ZS11 566 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 GPRC5DQ9NZD1 345 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 COPG1Q9Y678 874 aaKnown RBP13.64□□□□□ -0.23
PTPRK-204ENST00000368210 NID2Q14112 1375 aa13.64□□□□□ -0.23
PTPRK-204ENST00000368210 TAF4O00268 1085 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms