RNA–Protein interactions for RNA: ENST00000367979.6

NR1I3-201, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-201ENST00000367979 HESX1Q9UBX0 185 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 AGO1Q9UL18 857 aaKnown RBP13.44□□□□□ -0.26
NR1I3-201ENST00000367979 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.44□□□□□ -0.26
NR1I3-201ENST00000367979 PMM2O15305 246 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 AFPP02771 609 aaKnown RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 CISD3P0C7P0 127 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 PPP1R2P41236 205 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 TNFRSF4P43489 277 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 YWHAEP62258 255 aaKnown RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 PLA2G2CQ5R387 149 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 PMS2CLQ68D20 193 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 LCLAT1Q6UWP7 414 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 RSRC2Q7L4I2 434 aaKnown RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 ZNF276Q8N554 614 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 GPR161Q8N6U8 529 aaKnown RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 EHBP1Q8NDI1 1231 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 OLIG1Q8TAK6 271 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 ZC3H10Q96K80 434 aaKnown RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 CRACR2AQ9BSW2 395 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 DNAI2Q9GZS0 605 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 LRRC4Q9HBW1 653 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 MBD1Q9UIS9 605 aaPredicted RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 SPAG17Q6Q759 2223 aa13.43□□□□□ -0.26
NR1I3-201ENST00000367979 MUC22E2RYF6 1773 aaPredicted RBP13.43□□□□□ -0.26
NR1I3-201ENST00000367979 ATXN2Q99700 1313 aaKnown RBP13.42□□□□□ -0.26
NR1I3-201ENST00000367979 A0A1W2PQF6 199 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 PATE3B3GLJ2 98 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 WASH3PC4AMC7 463 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 LRP3O75074 770 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 PAEPP09466 180 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 HOXB2P14652 356 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 GABRG2P18507 467 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 DGKGP49619 791 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 SGSHP51688 502 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 SLC8A3P57103 927 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 DAOAP59103 153 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 CREB5Q02930 508 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 GEN1Q17RS7 908 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 AASDHQ4L235 1098 aaPredicted RBP13.42□□□□□ -0.26
NR1I3-201ENST00000367979 EOGTQ5NDL2 527 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 BSPRYQ5W0U4 402 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 ARMCX6Q7L4S7 300 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 TADA2BQ86TJ2 420 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 IRF2BP1Q8IU81 584 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 CREBRFQ8IUR6 639 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 SLC35F5Q8WV83 523 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
NR1I3-201ENST00000367979 XPO6Q96QU8 1125 aaKnown RBP13.42□□□□□ -0.26
NR1I3-201ENST00000367979 FAM124BQ9H5Z6 455 aaPredicted RBP13.42□□□□□ -0.26
NR1I3-201ENST00000367979 CD248Q9HCU0 757 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 BCCIPQ9P287 314 aaKnown RBP eCLIP13.42□□□□□ -0.26
NR1I3-201ENST00000367979 PLXND1Q9Y4D7 1925 aa13.42□□□□□ -0.26
NR1I3-201ENST00000367979 THADAQ6YHU6 1953 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 PRR5-ARHGAP8B1AHC4 643 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 P4HA2O15460 535 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 TSPAN3O60637 253 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 PENKP01210 267 aaPredicted RBP13.41□□□□□ -0.26
NR1I3-201ENST00000367979 ZNF806P0C7X5 589 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 SLC9A1P19634 815 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 P2RY2P41231 377 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 ARHGAP8P85298 464 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 GCNT1Q02742 428 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 ARHGAP18Q8N392 663 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 DEFB119Q8N690 84 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 TRIML1Q8N9V2 468 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 NETO1Q8TDF5 533 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 MIS12Q9H081 205 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 POLMQ9NP87 494 aaPredicted RBP13.41□□□□□ -0.26
NR1I3-201ENST00000367979 CALCOCO1Q9P1Z2 691 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 WDR35Q9P2L0 1181 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 CYTH4Q9UIA0 394 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 RWDD2AQ9UIY3 292 aa13.41□□□□□ -0.26
NR1I3-201ENST00000367979 NUP205Q92621 2012 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 SLC30A4O14863 429 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 KRT5P13647 590 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 NDUFV2P19404 249 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 NTSR1P30989 418 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 MFAP3P55082 362 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 COG7P83436 770 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 TRIP4Q15650 581 aaPredicted RBP13.4□□□□□ -0.26
NR1I3-201ENST00000367979 ELF2Q15723 593 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 CNGA2Q16280 664 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
NR1I3-201ENST00000367979 DPCR1Q3MIW9 517 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms