RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 TNFAIP2Q03169 654 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 KLC1Q07866 573 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 PDK2Q15119 407 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 KCNT2Q6UVM3 1135 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 CES3Q6UWW8 571 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPN7-202ENST00000367279 CCNYQ8ND76 341 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 UCMAQ8WVF2 138 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 FAM149B1Q96BN6 582 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 EBF4Q9BQW3 602 aa12.77□□□□□ -0.37
PTPN7-202ENST00000367279 PPEF2O14830 753 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 TBX10O75333 385 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-202ENST00000367279 IL4RP24394 825 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 PDE1BQ01064 536 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 LRRC74BQ6ZQY2 392 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 MOB2Q70IA6 237 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-202ENST00000367279 TRIM42Q8IWZ5 723 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 POU5F2Q8N7G0 328 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 ENDOVQ8N8Q3 282 aaKnown RBP12.76□□□□□ -0.37
PTPN7-202ENST00000367279 HIPK4Q8NE63 616 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 WWP1Q9H0M0 922 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 CXCL16Q9H2A7 254 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 IFT122Q9HBG6 1241 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 HES2Q9Y543 173 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 MCM3APO60318 1980 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 E7ENQ6 273 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 RFPL1O75677 317 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 TSHRP16473 764 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 EDNRBP24530 442 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 GMPRP36959 345 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 GABRB2P47870 512 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 Q3C1V9 767 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 C1orf146Q5VVC0 180 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 PLPPR4Q7Z2D5 763 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 NME8Q8N427 588 aa12.76□□□□□ -0.37
PTPN7-202ENST00000367279 RBM15BQ8NDT2 890 aaKnown RBP12.76□□□□□ -0.37
PTPN7-202ENST00000367279 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN7-202ENST00000367279 IGKV6-21A0A0C4DH24 114 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 PRR5-ARHGAP8B1AHC4 643 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 NPTXRO95502 500 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TGM2P21980 687 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TUBP50607 506 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 ARHGAP8P85298 464 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SLC6A3Q01959 620 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SLC34A1Q06495 639 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 AP1B1Q10567 949 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 PYROXD2Q8N2H3 581 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 STKLD1Q8NE28 680 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 FAM49AQ9H0Q0 323 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 LCTP09848 1927 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 A8MXQ7 604 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 MAP3K7O43318 606 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TGDSO95455 350 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 MCF2P10911 925 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SKIP12755 728 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 ATICP31939 592 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 CCNG1P51959 295 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 CES4AQ5XG92 561 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 FAM131BQ86XD5 332 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 AGR3Q8TD06 166 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 NRG4Q8WWG1 115 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 NDRG1Q92597 394 aaKnown RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 PGLYRP2Q96PD5 576 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 C20orf27Q9GZN8 174 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 TLE6Q9H808 572 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 GBA2Q9HCG7 927 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 CORO1CQ9ULV4 474 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 AP4E1Q9UPM8 1137 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 ADM5C9JUS6 153 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SMIM24O75264 130 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 CCDC130P13994 396 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 EPHB1P54762 984 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SLC10A2Q12908 348 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 PPP2R5DQ14738 602 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 FASTKD1Q53R41 847 aaKnown RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 SCUBE1Q8IWY4 988 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 LGMNQ99538 433 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
PTPN7-202ENST00000367279 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
PTPN7-202ENST00000367279 CYP4F11Q9HBI6 524 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms