RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 C20orf96Q9NUD7 363 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 CRLS1Q9UJA2 301 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ZNF510Q9Y2H8 683 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 TMED5Q9Y3A6 229 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 STARD13Q9Y3M8 1113 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 DAGLAQ9Y4D2 1042 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SNX9Q9Y5X1 595 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 PJA2O43164 708 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 AFPP02771 609 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ANXA5P08758 320 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 GHRP10912 638 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 MAPRE2Q15555 327 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 XKR4Q5GH76 650 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 FBXL19Q6PCT2 694 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ATCAYQ86WG3 371 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 MICU2Q8IYU8 434 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SLC43A3Q8NBI5 491 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ZNF555Q8NEP9 628 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 RIN3Q8TB24 985 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 CXorf40AQ8TE69 158 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 BSNDQ8WZ55 320 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 PPP1R14AQ96A00 147 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 TMEM237Q96Q45 408 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 CINPQ9BW66 212 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 NSMCE4AQ9NXX6 385 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 KCNJ14Q9UNX9 436 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 M0QYV0 167 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ANP32DO95626 131 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SRGNP10124 158 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SP100P23497 879 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 STIP1P31948 543 aaKnown RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ETV5P41161 510 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 TMEM145Q8NBT3 493 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 LEMD2Q8NC56 503 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 SYTL5Q8TDW5 730 aaPredicted RBP8.88□□□□□ -0.99
SYNE1-206ENST00000367253 FAR1Q8WVX9 515 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 ATXN10Q9UBB4 475 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 FHOD1Q9Y613 1164 aa8.88□□□□□ -0.99
SYNE1-206ENST00000367253 H3BRB1 525 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 SNPHO15079 494 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 NDUFA10O95299 355 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ENO2P09104 434 aaPredicted RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 UQCRBP14927 111 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 RPP38P78345 283 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 NSUN2Q08J23 767 aaKnown RBP eCLIP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 INPP5AQ14642 412 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PROSER3Q2NL68 480 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 NAALADL2Q58DX5 795 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 FAM171A1Q5VUB5 890 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 C11orf96Q7Z7L8 435 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 METTL21AQ8WXB1 218 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CXorf40BQ96DE9 158 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 SLC29A3Q9BZD2 475 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 TUT1Q9H6E5 874 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 MARCH7Q9H992 704 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 INTS10Q9NVR2 710 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 MTMR6Q9Y217 621 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 C2CD2Q9Y426 696 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 AP1M2Q9Y6Q5 423 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 UBE4BO95155 1302 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PNMA6EA0A0J9YXQ4 647 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 C5orf58C9J3I9 102 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CACNB4O00305 520 aaPredicted RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PPP1R37O75864 691 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CSH1P0DML2 217 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CSH2P0DML3 217 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 VAV1P15498 845 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 SLC9A3P48764 834 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 GDI2P50395 445 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PGDP52209 483 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 TPI1P60174 286 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ZBED6P86452 979 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 RHAGQ02094 409 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 TAF8Q7Z7C8 310 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 DTX3LQ8TDB6 740 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ACMSDQ8TDX5 336 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 RIT1Q92963 219 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 C19orf60Q96EN9 201 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PDCD10Q9BUL8 212 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 LSG1Q9H089 658 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CROTQ9UKG9 612 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 DNPEPQ9ULA0 475 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 LRRC53A6NM62 1247 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 KRT1P04264 644 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 UBTFL6P0CB48 400 aaPredicted RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CCL5P13501 91 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 TCF3P15923 654 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ACADSP16219 412 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 DGKEP52429 567 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 NPEPPSP55786 919 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 ERVK-21P61565 698 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 OCLNQ16625 522 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 DNAL1Q4LDG9 190 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 AARS2Q5JTZ9 985 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 PDE12Q6L8Q7 609 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 RBM23Q86U06 439 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 CAND1Q86VP6 1230 aaKnown RBP8.87□□□□□ -0.99
SYNE1-206ENST00000367253 COLGALT2Q8IYK4 626 aa8.87□□□□□ -0.99
SYNE1-206ENST00000367253 METTL6Q8TCB7 284 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms