RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 DTNAQ9Y4J8 743 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ARAP2Q8WZ64 1704 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 A0A0B4J269 797 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 F9P00740 461 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ASS1P00966 412 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CHRNB2P17787 502 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 NAPEPLDQ6IQ20 393 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 BBS12Q6ZW61 710 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ANKS1BQ7Z6G8 1248 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 DAW1Q8N136 415 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 STN1Q9H668 368 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 GGA3Q9NZ52 723 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 GRHL1Q9NZI5 618 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 BLOC1S6Q9UL45 172 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 NUP98P52948 1817 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MTTPP55157 894 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 NBPF12Q5TAG4 269 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MON1BQ7L1V2 547 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 UNC93AQ86WB7 457 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SH3TC2Q8TF17 1288 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 RXFP2Q8WXD0 754 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 OTUD5Q96G74 571 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ACO2Q99798 780 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SPATC1LQ9H0A9 340 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 AURKCQ9UQB9 309 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MAST2Q6P0Q8 1798 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 PTPRAP18433 802 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MMP8P22894 467 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CDK7P50613 346 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ANO4Q32M45 955 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CYP4A22Q5TCH4 519 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 LINC00523Q86TU6 105 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZNF75CPQ92670 426 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SEMA4DQ92854 862 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 FAM193BQ96PV7 902 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 BTBD10Q9BSF8 475 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 PLEKHA5Q9HAU0 1116 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ADARB2Q9NS39 739 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MAFBQ9Y5Q3 323 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 B2RBV5 119 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TAF4O00268 1085 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MICAL2O94851 1124 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 DPYSL3Q14195 570 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 RELL1Q8IUW5 271 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 NDUFAF2Q8N183 169 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ACMSDQ8TDX5 336 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CAPSLQ8WWF8 208 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 PGBD4Q96DM1 585 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TMEM237Q96Q45 408 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 LRRC40Q9H9A6 602 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 RABGEF1Q9UJ41 708 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 AKAP10O43572 662 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CLPTM1O96005 669 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 S100A9P06702 114 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TARSP26639 723 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 YWHAHQ04917 246 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 WASHC5Q12768 1159 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SNAPC2Q13487 334 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 KBTBD12Q3ZCT8 623 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TSHZ1Q6ZSZ6 1077 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 UBE2Q1Q7Z7E8 422 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SIAH1Q8IUQ4 282 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 NOL6Q9H6R4 1146 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TISP43B9A030 160 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TRIM49D1C9J1S8 452 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 MPOP05164 745 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TAL1P17542 331 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 PAX3P23760 479 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 CHKAP35790 457 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 ARL2P36404 184 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TPI1P60174 286 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 BNIP1Q12981 228 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 DGKDQ16760 1214 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 DEPDC1Q5TB30 811 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 GRTP1Q5TC63 336 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TTC27Q6P3X3 843 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 NIPA2Q8N8Q9 360 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 TTC8Q8TAM2 541 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 DHX33Q9H6R0 707 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 HAO1Q9UJM8 370 aa5.53□□□□□ -1.52
CDC42BPA-204ENST00000366767 SYNJ2BP-COX16A0A087WUM0 186 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 C3orf70A6NLC5 250 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 EEF2KO00418 725 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TIMM44O43615 452 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 FBXO21O94952 628 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TGDSO95455 350 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 KCNA2P16389 499 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 C4BPBP20851 252 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PTPN7P35236 360 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 C21orf59P57076 290 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 BST2Q10589 180 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CAPSQ13938 189 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PKN2Q16513 984 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TTC33Q6PID6 262 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRABD2AQ86V40 505 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 PALB2Q86YC2 1186 aa5.52□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCDC126Q96EE4 140 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms