RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 NFICP08651 508 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 NPR3P17342 541 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 POMGNT2Q8NAT1 580 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 KBTBD8Q8NFY9 601 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 SEPT5Q99719 369 aaPredicted RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 SLC25A23Q9BV35 468 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 TDRD3Q9H7E2 651 aaKnown RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 MINPP1Q9UNW1 487 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 SYNMO15061 1565 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 HS6ST1O60243 411 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 RAG1P15918 1043 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 HOXB8P17481 243 aaPredicted RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 BGNP21810 368 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 CCNG1P51959 295 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 FCHO2Q0JRZ9 810 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 CUL2Q13617 745 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 CDH18Q13634 790 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 TSHZ1Q6ZSZ6 1077 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 EEF1AKMT1Q8WVE0 214 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 MLPHQ9BV36 600 aaPredicted RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 ACTR8Q9H981 624 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 PLGRKTQ9HBL7 147 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 SHOC2Q9UQ13 582 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 CDK7P50613 346 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
NID1-202ENST00000366595 NAB1Q13506 487 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 C10orf120Q5SQS8 335 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 FBXO42Q6P3S6 717 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 FIG4Q92562 907 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 HPDLQ96IR7 371 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 TBC1D13Q9NVG8 400 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
NID1-202ENST00000366595 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
NID1-202ENST00000366595 PLA2G6O60733 806 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 GLP2RO95838 553 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 PDHBP11177 359 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CCDC130P13994 396 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 KCTD21Q4G0X4 260 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 TMEM63BQ5T3F8 832 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 STK32CQ86UX6 486 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 C8orf59Q8N0T1 100 aaPredicted RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 SLC44A5Q8NCS7 719 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 TMEM143Q96AN5 459 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CHID1Q9BWS9 393 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 EHD3Q9NZN3 535 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CCDC182A6NF36 153 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 INPP4BO15327 924 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 ATMINO43313 823 aaPredicted RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 IDH3BO43837 385 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 GH1P01241 217 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 MYL4P12829 197 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 MYBPC2Q14324 1141 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 TTC23Q5W5X9 447 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 GPRASP2Q96D09 838 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 OXNAD1Q96HP4 312 aaPredicted RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 CMTM6Q9NX76 183 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 TRPC4Q9UBN4 977 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 VAV1P15498 845 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 RPA1P27694 616 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 TRAP1Q12931 704 aaKnown RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 TMEM132BQ14DG7 1078 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 QPRTQ15274 297 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 SCARA3Q6AZY7 606 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 STX12Q86Y82 276 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CAMK1DQ8IU85 385 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 UCMAQ8WVF2 138 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 MYLPFQ96A32 169 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 THAP2Q9H0W7 228 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 SORCS3Q9UPU3 1222 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 FCHO1O14526 889 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 MRASO14807 208 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CBFA2T3O75081 653 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 RFX3P48380 749 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CCDC157Q569K6 752 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 GRTP1Q5TC63 336 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CAPSLQ8WWF8 208 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 SEPHS2Q99611 448 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 CAPN10Q9HC96 672 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 MAPRE3Q9UPY8 281 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 PIK3CDO00329 1044 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 MGRN1O60291 552 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 ALDH1A3P47895 512 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 MGAT5BQ3V5L5 792 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 NANOGNBQ7Z5D8 188 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 GTF3C2Q8WUA4 911 aaPredicted RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 REPS1Q96D71 796 aa17.18■□□□□ 0.34
NID1-202ENST00000366595 DDX20Q9UHI6 824 aaKnown RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 UBQLN1Q9UMX0 589 aaKnown RBP17.18■□□□□ 0.34
NID1-202ENST00000366595 CRABP2P29373 138 aa17.17■□□□□ 0.34
NID1-202ENST00000366595 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms