RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 PRR11Q96HE9 360 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 MESP1Q9BRJ9 268 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 DCLK3Q9C098 648 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 ISCUQ9H1K1 167 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 DDX31Q9H8H2 851 aaKnown RBP0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PLAC1Q9HBJ0 212 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 IGSF9Q9P2J2 1179 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 UTS2RQ9UKP6 389 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 FZD4Q9ULV1 537 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PCDHA6Q9UN73 950 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 MAPRE3Q9UPY8 281 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 GAB2Q9UQC2 676 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PLAAQ9Y263 795 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 DTX4Q9Y2E6 619 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PCDHGA9Q9Y5G4 932 aaKnown RBP0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PCDHGA8Q9Y5G5 932 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PCDHGA7Q9Y5G6 932 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PCDHGA6Q9Y5G7 932 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 PCDHGA3Q9Y5H0 932 aa0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 HEMK1Q9Y5R4 338 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 CFAP20Q9Y6A4 193 aaKnown RBP0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-1260P-201ENST00000362944 WASHC2AQ641Q2 1341 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KIR2DS5A0A0G2JLQ3 304 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KIR2DS3K7RE56 304 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 AGPSO00116 658 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 EXOC5O00471 708 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SLC16A5O15375 505 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ASAP2O43150 1006 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PRPF4O43172 522 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 AKAP10O43572 662 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 XPOTO43592 962 aaKnown RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 XPNPEP2O43895 674 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CDC45O75419 566 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KRT36O76013 467 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MT-CO1P00395 513 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MBPP02686 304 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 LCATP04180 440 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 RPLP2P05387 115 aaKnown RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PRSS2P07478 247 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SNRNP70P08621 437 aaKnown RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FTH1P19P0C7X4 201 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FCGR1AP12314 374 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PRG2P13727 222 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 HGFP14210 728 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ZNF10P21506 573 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 UQCRC1P31930 480 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 GALNSP34059 522 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KCNJ4P48050 445 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SLC11A2P49281 568 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FXR1P51114 621 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 JAK3P52333 1124 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 BCAT1P54687 386 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 WDR5P61964 334 aaKnown RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ROR2Q01974 943 aaKnown RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 POU3F1Q03052 451 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 ARL16Q0P5N6 197 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KLF1Q13351 362 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CCNIQ14094 377 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SLC39A14Q15043 492 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PGM5Q15124 567 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 DLGAP5Q15398 846 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MGAT5BQ3V5L5 792 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PLA1AQ53H76 456 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CERCAMQ5T4B2 595 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 DENND2CQ68D51 928 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KCTD20Q7Z5Y7 419 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SMIM29Q86T20 159 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SLC15A4Q8N697 577 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 C11orf44Q8N8P7 122 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FAM71DQ8N9W8 422 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 IL17RCQ8NAC3 791 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 IGSF21Q96ID5 467 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MOGAT1Q96PD6 335 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PUS7Q96PZ0 661 aaKnown RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 EPYCQ99645 322 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 VN1R3Q9BXE9 311 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 WDCPQ9H6R7 721 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MAP6D1Q9H9H5 199 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 OCIAD1Q9NX40 245 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FEZ2Q9UHY8 353 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 VPS4AQ9UN37 437 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 USP22Q9UPT9 525 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TMX2Q9Y320 296 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PLEKHM1Q9Y4G2 1056 aa0.71□□□□□ -2.3
RNU6-1260P-201ENST00000362944 PRRC2AP48634 2157 aaKnown RBP0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TRIM75PA6NK02 468 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 TMEM233B4DJY2 109 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 H3BUI4 141 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 I6L893 689 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 MDM4O15151 490 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 RTL8CO15255 209 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CCP110O43303 1012 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KIF1CO43896 1103 aaKnown RBP0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 SRGAP2O75044 1071 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 RASAL1O95294 804 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 FTLP02792 175 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 WNT1P04628 370 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 CYP1A2P05177 515 aa0.7□□□□□ -2.3
RNU6-1260P-201ENST00000362944 KRT5P13647 590 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms