RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 ATF7P17544 494 aaPredicted RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 TFEBP19484 476 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 KCNA5P22460 613 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 RPS6KB1P23443 525 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 SHC1P29353 583 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 HOXA7P31268 230 aaPredicted RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 GYS2P54840 703 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 LINC01547P58512 204 aaPredicted RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 KPNB1Q14974 876 aaKnown RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 RNF212Q495C1 297 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 CREB3L3Q68CJ9 461 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 FOXL2NBQ6ZUU3 175 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 TICAM1Q8IUC6 712 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 PAQR4Q8N4S7 273 aaPredicted RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 DCBLD1Q8N8Z6 715 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 PIGKQ92643 395 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 SCAMP4Q969E2 229 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 DHRS4Q9BTZ2 278 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 HTATIP2Q9BUP3 242 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 MOV10Q9HCE1 1003 aaKnown RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 ZNF275Q9NSD4 429 aaPredicted RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 ZFP57Q9NU63 452 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 SSX2IPQ9Y2D8 614 aa0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 MRPS23Q9Y3D9 190 aaKnown RBP0.1□□□□□ -2.39
RNU6-228P-201ENST00000362700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 MAGEA13PA6NCF6 341 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 ERC2O15083 957 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 KIF20AO95235 890 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 CHEK2O96017 543 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 PRSS1P07477 247 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 ARSBP15848 533 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 TSHRP16473 764 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 PPIFP30405 207 aaKnown RBP0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 PTGER3P43115 390 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 SLC6A9P48067 706 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 MFSD13AQ14CX5 517 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 FSCBQ5H9T9 825 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 ARHGAP40Q5TG30 622 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 CAND1Q86VP6 1230 aaKnown RBP0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 PARP8Q8N3A8 854 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 SORCS1Q8WY21 1168 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 EME1Q96AY2 570 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 ZNF653Q96CK0 615 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 PLEKHA4Q9H4M7 779 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 GREM2Q9H772 168 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 ZDHHC18Q9NUE0 388 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 MAN1B1Q9UKM7 699 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 PCNX3Q9H6A9 2034 aa0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 GREB1LQ9C091 1923 aaPredicted RBP0.09□□□□□ -2.4
RNU6-228P-201ENST00000362700 NOTCH1P46531 2555 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 LCHNA4D1U4 455 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 GAGE12JA6NER3 117 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 ADCY3O60266 1144 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 RASSF2P50749 326 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 CDK17Q00537 523 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 TRIM61Q5EBN2 209 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 MUM1L1Q5H9M0 696 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 LAYNQ6UX15 382 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 UNQ6126/PRO20091Q6UXV3 157 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 PTCHD4Q6ZW05 846 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 KRT26Q7Z3Y9 468 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 FGD2Q7Z6J4 655 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 KRTAP13-1Q8IUC0 172 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 ZNF669Q96BR6 464 aaPredicted RBP0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 BICD1Q96G01 975 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 ABHD8Q96I13 439 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 SDHCQ99643 169 aaPredicted RBP0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 GAREM1Q9H706 876 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 AAMDCQ9H7C9 122 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 ERVMER34-1Q9H9K5 563 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 H2AFY2Q9P0M6 372 aaPredicted RBP0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 CPNE7Q9UBL6 633 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 DPP7Q9UHL4 492 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 EDARQ9UNE0 448 aa0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 R3HCC1Q9Y3T6 440 aaKnown RBP0.08□□□□□ -2.4
RNU6-228P-201ENST00000362700 NEBP20929 6669 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 MCIDASD6RGH6 385 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 EYA2O00167 538 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 PSMD9O00233 223 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 RRHO14718 337 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 PRKD3O94806 890 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 SSBP05455 408 aaKnown RBP eCLIP0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 TUBBP07437 444 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 MGMTP16455 207 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 TUBB4BP68371 445 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 CCT2P78371 535 aaKnown RBP0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 TRAF1Q13077 416 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 TRAF3Q13114 568 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 MTA1Q13330 715 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 DDR2Q16832 855 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 RGS7BPQ6MZT1 257 aaPredicted RBP0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 TUBA1AQ71U36 451 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 MARCH9Q86YJ5 346 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 CCDC185Q8N715 623 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 EFHBQ8N7U6 833 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 BMPERQ8N8U9 685 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 ZNF610Q8N9Z0 462 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 FATE1Q969F0 183 aa0.07□□□□□ -2.4
RNU6-228P-201ENST00000362700 SIK2Q9H0K1 926 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms