RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 ECSITQ9BQ95 431 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 GGA3Q9NZ52 723 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 SYCE1LA8MT33 242 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 CSPG5O95196 566 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 VTNP04004 478 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 MMP8P22894 467 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 TSTA3Q13630 321 aaPredicted RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 SPDYAQ5MJ70 313 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 TEDDM1Q5T9Z0 273 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 TXNRD3NBQ6F5E7 133 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 PIN4Q9Y237 131 aaKnown RBP14.32□□□□□ -0.12
COL6A1-201ENST00000361866 AK5Q9Y6K8 562 aa14.32□□□□□ -0.12
COL6A1-201ENST00000361866 A0A096LPK6 155 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 TPP1O14773 563 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 SUPT7LO94864 414 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PLK1P53350 603 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 MAPK10P53779 464 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 GDF10P55107 478 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 LAMTOR4Q0VGL1 99 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 CYP1B1Q16678 543 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 DGKDQ16760 1214 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 C6orf10Q5SRN2 563 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PHF13Q86YI8 300 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 FRMD8P1Q9BZ68 369 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 ZNF395Q9H8N7 513 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 MYOZ2Q9NPC6 264 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 MRPL40Q9NQ50 206 aaKnown RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 GJB1P08034 283 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 MPP3Q13368 585 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PDK2Q15119 407 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 NBPF12Q5TAG4 269 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 ADAM32Q8TC27 787 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 RNF217Q8TC41 542 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 ZNF398Q8TD17 642 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 TRIM15Q9C019 465 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PTPRHQ9HD43 1115 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PRPF4O43172 522 aaKnown RBP eCLIP14.31□□□□□ -0.129e-6■□□□□ 10.5
COL6A1-201ENST00000361866 PHGDHO43175 533 aaKnown RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 JCHAINP01591 159 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PTPN20Q4JDL3 420 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 TMTC4Q5T4D3 741 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PCDH20Q8N6Y1 951 aaKnown RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PLEKHO2Q8TD55 490 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PABPC5Q96DU9 382 aaKnown RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 EPAS1Q99814 870 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 ETNK2Q9NVF9 386 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 PNPOQ9NVS9 261 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 ARHGEF38Q9NXL2 777 aa14.31□□□□□ -0.12
COL6A1-201ENST00000361866 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
COL6A1-201ENST00000361866 SAC3D1A6NKF1 404 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 FAM200BP0CF97 657 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 NCAM1P13591 858 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 HOXA10P31260 410 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 GTF2A2P52657 109 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 NAGLUP54802 743 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CCNA1P78396 465 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 OCA2Q04671 838 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 MGAT5Q09328 741 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 TAF5Q15542 800 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 MAPRE2Q15555 327 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 AGKQ53H12 422 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 C15orf52Q6ZUT6 534 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 C12orf50Q8NA57 414 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 JADE3Q92613 823 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 TNIP3Q96KP6 325 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 PIF1Q9H611 641 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 COL20A1Q9P218 1284 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 LGALS13Q9UHV8 139 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 A0A087WZ62 844 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 SIGLEC16A6NMB1 481 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 PPIDQ08752 370 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 ACVR2BQ13705 512 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 KCTD21Q4G0X4 260 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 ANGEL2Q5VTE6 544 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 ZBTB49Q6ZSB9 765 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 MARK2Q7KZI7 788 aaKnown RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 SH3BP5LQ7L8J4 393 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 DHDDSQ86SQ9 333 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 FDXACB1Q9BRP7 624 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 PRMT7Q9NVM4 692 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-201ENST00000361866 DDIT4Q9NX09 232 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 ORC6Q9Y5N6 252 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 DUOX1Q9NRD9 1551 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 IL18RAPO95256 599 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 VWA5B1Q5TIE3 1220 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 MON1BQ7L1V2 547 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 CMC1Q7Z7K0 106 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 PHF21BQ96EK2 531 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 MFSD14AQ96MC6 490 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 TMEM79Q9BSE2 394 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 ATXN3LQ9H3M9 355 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
COL6A1-201ENST00000361866 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms